prot_S-firma_M_contig9393.20372.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9393.20372.1
Unique Nameprot_S-firma_M_contig9393.20372.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length208
Homology
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: D8LRN1_ECTSI (Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2879 RepID=D8LRN1_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 3.290e-21
Identity = 60/145 (41.38%), Postives = 72/145 (49.66%), Query Frame = 0
Query:    1 MRVAWHSAVLLPVLLLPVVMSQDMVPTPSPTGTGMPTEMPVALDDMSYSSLTMSPXXXXXXXXXXXSDIYSEMCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPG----GSEACCGNAIMDSGLLCSETGEAPCIIDEVVEFPT 141
            M+++W SA+LLPVLLLPVV+  D                                                  C+NG+EGIDGNG+VCCP+ CG CAG GC         G+++CCGNAI  SG LCSETG APCIIDE    PT
Sbjct:    1 MKLSWESALLLPVLLLPVVVQGDT-------------------------------------------------CTNGIEGIDGNGVVCCPLGCGRCAGEGCTAFGSENGLGADSCCGNAIKASGRLCSETGSAPCIIDEEGPSPT 96          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: D7G651_ECTSI (Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G651_ECTSI)

HSP 1 Score: 86.7 bits (213), Expect = 3.590e-16
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   71 SEMCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPG----GSEACCGNAIMDSGLLCSETGEAPCII 133
            ++ CS+G EGIDGNG+VCCP+ CG CAG GC T       GSE+CCGN +   GL C +T EAPCII
Sbjct:  501 TQTCSDGTEGIDGNGVVCCPIGCGQCAGDGCGTAGSANGLGSESCCGNGVKSLGLYCDDTNEAPCII 567          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: D7FQV4_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV4_ECTSI)

HSP 1 Score: 84.0 bits (206), Expect = 2.900e-15
Identity = 39/66 (59.09%), Postives = 45/66 (68.18%), Query Frame = 0
Query:   72 EMCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPG----GSEACCGNAIMDSGLLCSETGEAPCII 133
            E CSNG+EGIDGNG+VCCP+ C  C G+GC T       GSE+CCG  I  SG  C +T EAPCII
Sbjct:  543 ETCSNGLEGIDGNGVVCCPLECNQCGGTGCTTSGSAAGLGSESCCGGGIKASGAYCDDTNEAPCII 608          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: A0A6H5JC43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC43_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 3.920e-15
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   71 SEMCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPG----GSEACCGNAIMDSGLLCSETGEAPCII 133
            SE CSNG+EGIDGNG+VCCP+ CG C G+GC T       G+++CCG +I  S   C ET EAPCII
Sbjct:  344 SETCSNGVEGIDGNGVVCCPLGCGQCGGAGCTTSGAAAGLGADSCCGGSIKASDEYCDETNEAPCII 410          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: A0A6H5JGP9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP9_9PHAE)

HSP 1 Score: 80.1 bits (196), Expect = 4.160e-15
Identity = 36/63 (57.14%), Postives = 45/63 (71.43%), Query Frame = 0
Query:   74 CSNGMEGIDGNGMVCCPVSCGACAGSGCATRPG----GSEACCGNAIMDSGLLCSETGEAPCI 132
            C++G+EGIDGNG+VCCP+ CG CAG+GC         GSE+CCG  + D+G  C  TGEAPCI
Sbjct:   48 CNDGIEGIDGNGVVCCPLECGQCAGTGCTNFGADFGLGSESCCGGGVKDAGNYCDVTGEAPCI 110          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: A0A6H5K5T3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5T3_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 1.190e-13
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:   73 MCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPGGSEACCGNAIMDSGLLCSETGEAPCI 132
            MC  G+ GI  +  VCC  SCG+C GSGC +R GGSE+CCG  +  SG  CS TGEAPC+
Sbjct:    1 MCDGGIVGIQASD-VCCSASCGSCGGSGCTSRDGGSESCCGGGVRASGRYCSITGEAPCL 59          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: A0A6H5L8H5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 79.3 bits (194), Expect = 1.210e-13
Identity = 37/63 (58.73%), Postives = 44/63 (69.84%), Query Frame = 0
Query:   74 CSNGMEGIDGNGMVCCPVSCGACAGSGCATRPGG----SEACCGNAIMDSGLLCSETGEAPCI 132
            CS+G+EGIDGNG+VCCP+ CG CAGSGC+T        S +CCG  I  SG  C +TG APCI
Sbjct:  535 CSDGIEGIDGNGVVCCPLGCGQCAGSGCSTAGAANGLTSSSCCGGGIKSSGNYCDDTGVAPCI 597          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: D7FIC5_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIC5_ECTSI)

HSP 1 Score: 79.0 bits (193), Expect = 1.450e-13
Identity = 37/67 (55.22%), Postives = 45/67 (67.16%), Query Frame = 0
Query:   71 SEMCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPGGS----EACCGNAIMDSGLLCSETGEAPCII 133
            +E CSNG+EGIDGNG+VCCP++CG C G GC T    +    ++CCG  I  S   C ET EAPCII
Sbjct:  445 TETCSNGLEGIDGNGVVCCPLACGQCGGKGCYTSGSANGLSGDSCCGGGIKASDEYCDETNEAPCII 511          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: A0A6H5KHK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHK8_9PHAE)

HSP 1 Score: 74.3 bits (181), Expect = 1.830e-13
Identity = 35/62 (56.45%), Postives = 42/62 (67.74%), Query Frame = 0
Query:   73 MCSNGMEGIDGNGMVCCPVSCGACAGSGCATRPGGSEACCGNAIMDSGLLCSETGEAPCIID 134
            MC  G+ GI  +  VCC  SCG+C GSGC +R GGSE+CCG  +  SG  CS TGEAPC+ D
Sbjct:   58 MCDGGIVGIQASD-VCCSASCGSCGGSGCTSRDGGSESCCGGGVRASGRYCSITGEAPCMTD 118          
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Match: D7FUJ9_ECTSI (Unsaturated glucuronyl hydrolase, family GH88 n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUJ9_ECTSI)

HSP 1 Score: 78.6 bits (192), Expect = 2.070e-13
Identity = 37/65 (56.92%), Postives = 46/65 (70.77%), Query Frame = 0
Query:   74 CSNGMEGIDGNGMVCCPVSCGACAGSGCATRPG-----GSEACCGNAIMDSGLLCSETGEAPCII 133
            CSNG++GIDGNG+VCCP+ C  C GSGC T  G     G+E+CCG+ +  SG  C +T EAPCII
Sbjct:  527 CSNGVQGIDGNGIVCCPMECNQCGGSGC-THAGRAAGLGAESCCGSGVKASGRYCDDTDEAPCII 590          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9393.20372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRN1_ECTSI3.290e-2141.38Uncharacterized protein n=4 Tax=Ectocarpus TaxID=2... [more]
D7G651_ECTSI3.590e-1658.21Mannuronan C-5-epimerase C-terminal n=1 Tax=Ectoca... [more]
D7FQV4_ECTSI2.900e-1559.09Unsaturated glucuronyl hydrolase, family GH88 n=1 ... [more]
A0A6H5JC43_9PHAE3.920e-1558.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JGP9_9PHAE4.160e-1557.14Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5T3_9PHAE1.190e-1356.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L8H5_9PHAE1.210e-1358.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FIC5_ECTSI1.450e-1355.22Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KHK8_9PHAE1.830e-1356.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FUJ9_ECTSI2.070e-1356.92Unsaturated glucuronyl hydrolase, family GH88 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..207
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..7
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 8..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.919

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9393contigS-firma_M_contig9393:503..2066 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9393.20372.1mRNA_S-firma_M_contig9393.20372.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9393 503..3071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9393.20372.1 ID=prot_S-firma_M_contig9393.20372.1|Name=mRNA_S-firma_M_contig9393.20372.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=208bp
MRVAWHSAVLLPVLLLPVVMSQDMVPTPSPTGTGMPTEMPVALDDMSYSS
LTMSPTSSPTSSEPTSSDIYSEMCSNGMEGIDGNGMVCCPVSCGACAGSG
CATRPGGSEACCGNAIMDSGLLCSETGEAPCIIDEVVEFPTDDGGNATVT
PTPNTNTTTPSSSPTSLMTIPTSCENGTLPTFRYASTSGKVGQGRLCELW
FGRVCGG*
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