prot_S-firma_M_contig938.20351.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig938.20351.1
Unique Nameprot_S-firma_M_contig938.20351.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length553
Homology
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A6H5L4J3_9PHAE (RED_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4J3_9PHAE)

HSP 1 Score: 620 bits (1600), Expect = 1.690e-216
Identity = 414/553 (74.86%), Postives = 432/553 (78.12%), Query Frame = 0
Query:    1 MSEAQLSKVSSGRDKGEMDELKKLILSEKARTKHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAKDKKQKGTWRRGKLIMANDDDDLNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQLEALEGAGGDDRHGERGGSRAEVRARTLMGKTVLAVLRKLNLGQGAGGPDFRRVGYEFDLEPESVQEIPTAVAHSLGEDGEXXXXXXXXERHTNYLMEEGLLERVESAFTLFRQHGGKARRQRKRARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRAKVSINIFEDVDDRYVPAGSARSGPQPSAGAA--TKGYFSGLRAANAGESNAGTTTDALPTRAEMSATVKAAARAAAARVSGDKGTHSAAGXXXXXXXXXXXXXXXRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDVTNKKDAKPGPEGGSAXXXXXXXGGDK-NQDKHPAFDKPKASFPYGVKKSEMSGRKGGGGGK 550
            MS AQL +VSSGRD GEM+ELKKLILSEKARTKH                                  XXXXXXXXXXX   AK+KKQKGTWRRGKLI+A+  +D NKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQ+E LEG GGDDR G+R G RAEVRARTLMGKTVLAVLRKL+L QG GGPDFRRVGYEF+L+PES QEIPTAVAHSLG+DGE XXXXX  ERHTNYLMEE LLERVESAFTLFRQHGGKARRQRKRARD   XXXXXXXXXXXXXXXXXXXX                 ARRAKVSINIFEDVDDRYVP GSA S  QP  GAA   KGYFSGLRA NAG+S+     D LPTRAEMSATVKAAARAAAARVSGDK T S AG               RDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDED TNKKDAKPGPEG   XXXXXXX     N DKHPA+DKPKASFP+GVK+SE+S RKGGGG K
Sbjct:    1 MSAAQLKQVSSGRDLGEMEELKKLILSEKARTKHSDGGGGGAGERRVDGGDVSDDDEGEGDTRDRGGGXXXXXXXXXXXG--AKEKKQKGTWRRGKLIVASGVNDPNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEVLEGDGGDDRSGDRRGGRAEVRARTLMGKTVLAVLRKLSLSQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXR-ERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGXXXXXXXXXXXXXXXXXXXXDGGAGDMEDRDAAVLPPARRAKVSINIFEDVDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDSD--NKADVLPTRAEMSATVKAAARAAAARVSGDKKTSSEAGARETGKSGG------RDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEGXXXXXXXXXXXXXXXNHDKHPAYDKPKASFPFGVKRSELSVRKGGGGSK 542          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: D7FT17_ECTSI (RED_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT17_ECTSI)

HSP 1 Score: 522 bits (1344), Expect = 1.170e-179
Identity = 330/420 (78.57%), Postives = 343/420 (81.67%), Query Frame = 0
Query:  134 MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQLEALEGAGGDDRHGERGGSRAEVRARTLMGKTVLAVLRKLNLGQGAGGPDFRRVGYEFDLEPESVQEIPTAVAHSLGEDGEXXXXXXXXERHTNYLMEEGLLERVESAFTLFRQHGGKARRQRKRARDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARRAKVSINIFEDVDDRYVPAGSARSGPQPSAGAA--TKGYFSGLRAANAGESNAGTTTDALPTRAEMSATVKAAARAAAARVSGDKGTHSAAGXXXXXXXXXXXXXXXRDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDVTNKKDAKPGPEGGSAXXXXXXXGGDK-NQDKHPAFDKPKASFPYGVKKSEMSGRKGGGGGK 550
            MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQ+E LEG GGDDR+G+R G RAEVRARTLMGKTVLAVLRKL+LGQG GGPDFRRVGYEF+L+PES QEIPTAVAHSLG+DGE XXXXXX ERHTNYLMEE LLERVESAFTLFRQHGGKARRQRKRARD      XXXXXXXXXXXXXXXXXX                ARRAKVSINIFED+DDRYVP GSA S  QP  GAA   KGYFSGLRA NAG+S A    D LPTRAEMSATVKAAARAAAARVSGDK   S AG               RDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDED TNKKDAKPGPEG   XXXXXXX     N DKHPA+DKPKASFP+GVK+SE+SGRKGGGG K
Sbjct:    1 MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQIEILEGDGGDDRNGDRRGGRAEVRARTLMGKTVLAVLRKLSLGQGGGGPDFRRVGYEFELDPESTQEIPTAVAHSLGDDGEEXXXXXXRERHTNYLMEEDLLERVESAFTLFRQHGGKARRQRKRARDKAGGVGXXXXXXXXXXXXXXXXXXGGAGDTEDRDAAVLPPARRAKVSINIFEDIDDRYVPPGSAGSASQPPVGAAGAAKGYFSGLRAKNAGDS-ADNKADVLPTRAEMSATVKAAARAAAARVSGDKKASSGAGARETGKSGG------RDKIERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDATNKKDAKPGPEGXXXXXXXXXXXXXXXNHDKHPAYDKPKASFPFGVKRSELSGRKGGGGSK 413          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A7S3XKR5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XKR5_HETAK)

HSP 1 Score: 110 bits (276), Expect = 7.280e-23
Identity = 79/210 (37.62%), Postives = 111/210 (52.86%), Query Frame = 0
Query:  109 YRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREE---ERQQQLEA-LEGAGGDDRHGER----------------GGSRAEVRARTLMGKTVLAVLRKLNLGQGAGGPDFRRVGYEFDLEPESVQEIPTAVAHSLGEDGEXXXXXXXXERHTNYLMEEGLLERVESAFTLFRQHGGKARRQRKRAR 298
            YRDRA ERR+G NPDY D + +M  MD E +KYLGGDV+HTHLV+GLDYALL K+R+E   ++QQQLEA LE        G                    + A +R RT +G+ V     + +L        F ++ +EFDL+P S QE+PT V+ +  +           +      +++ L + VE AF   RQ     +R+RK+ R
Sbjct:  114 YRDRAAERRQGYNPDYDDDIEKMVQMDVEKSKYLGGDVKHTHLVRGLDYALLNKVRQETLEQQQQQLEATLEAQKKSKVQGXXXXXXXXXXXXXXXXXLAAAVARMRTRTPLGRGVQLYFAQRSLRAPV---QFGQLSFEFDLDPASAQEVPTTVSKAKAD------AEAEDDTLETAALDDALAQAVEQAFVGIRQGLKAGKRRRKKGR 314          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A4D9CVF8_9STRA (RED_N domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVF8_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.600e-17
Identity = 62/135 (45.93%), Postives = 81/135 (60.00%), Query Frame = 0
Query:  109 YRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQLEALEGA------------GGDDRHGERGGSRAEVRARTLMGKTVLAVLRKLNLGQGAGGPDFRRVGYEFDL 231
            YRDRA+ERRKG NPDY D++ ++  MDAETTKYLGGDV+HTHLVKGLDYALL ++R   ++ + E                 GG +R   R  S A  ++RTL+GK++ A L     G        RR+  E+DL
Sbjct:  150 YRDRAEERRKGVNPDYEDEIARLVHMDAETTKYLGGDVKHTHLVKGLDYALLQRVRAGLKEGEGEXXXXXXXXXXXXXXXXXGGMER---RRKSLAAAQSRTLLGKSLQAFLVDRLSGVVRPVEAIRRLALEYDL 281          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A7S2W4J1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4J1_9STRA)

HSP 1 Score: 95.1 bits (235), Expect = 3.530e-17
Identity = 84/230 (36.52%), Postives = 114/230 (49.57%), Query Frame = 0
Query:  108 KYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREE-----------ERQQQLEALEGAGGDDRHGERGGSRAEV------------RARTLMGKTVLAVL-RKLNLGQG-----AGGPD-------FRRVGYEFDLEP---ESVQEIPTAVAHSLGEDGEXXXXXXXXERHTNYLMEEGLLERVESAFTLFRQHGGKARRQRKRAR 298
            KYRDRA+ERRK  NPDY   + ++  +D E +KYLGGDVEHTHLVKGLDYALL K+R+E           + QQ  +      G  +   R  S A+V              RT MGK++   L R L L +      AG P        F R+G+EF L     E   E+PT V+ +    G         + H   L++E L++RV  A   +R+ G   +R +KR+R
Sbjct:   71 KYRDRANERRKEINPDYKTDVQKLLEVDIEKSKYLGGDVEHTHLVKGLDYALLSKVRDEITTDKDDIGATKSQQTKKTARIPQGLKKGSSRTVSAAQVLPTHRSTELAAISTRTRMGKSLAFFLARSLELEKPPVKSKAGRPTKTATEEAFERLGFEFQLSSHPSEGPSELPTMVSRAKVNWGGTGIGRDAEDDHLLALVDEKLIQRVVKALN-YRRDG---KRSKKRSR 296          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A812YWK0_SYMMI (SMU2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YWK0_SYMMI)

HSP 1 Score: 91.3 bits (225), Expect = 3.030e-16
Identity = 62/166 (37.35%), Postives = 82/166 (49.40%), Query Frame = 0
Query:  109 YRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQ----------QQLEALEGAGGDDRHGERGGSRAEVRARTLMGKTVLAVL---------------RKLNLGQGAGGPDFRRVGYEFDLEPESVQEIPTAVAHSLGE 249
            YRDRA ERR   NPDY  +L  +A++D E TKYLGGD EHTHLVKGLDYALL K+R +  +          Q LE+LE  G            + V A++ +G  + A+L               +  ++ +G       R  YEFD  P    E+PT +  S  E
Sbjct:   73 YRDRAQERRNDANPDYDAQLEAVANLDVEQTKYLGGDEEHTHLVKGLDYALLRKVRNQTEKNEARDQDSPDQLLESLENIGT---------RLSRVAAQSQLGDGIKALLLSDKGSFVRAGGRYVKAQDIPRGVKNTALSRTAYEFDTNPLGEAELPTVLRRSKEE 229          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A662WVS5_9STRA (RED_N domain-containing protein (Fragment) n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVS5_9STRA)

HSP 1 Score: 88.6 bits (218), Expect = 5.190e-15
Identity = 69/206 (33.50%), Postives = 108/206 (52.43%), Query Frame = 0
Query:  107 NKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQLEALEGAGGDDRHGERGGSRAEVRARTLMGKTVLAVLRKLNLGQGAGGPDFR---------------RVGYEFDLEPESVQEIPTAVAHSLGEDGEXXXXXXXXERHTNYLMEEGLLERVESAFTLFRQHGGKARRQRKRA 297
            N YRDRA ERRKG N D  D  ++ A +DAE +K+LGGD+EHTHLVKGLDYALL +++ E +Q+ L A E      +HGE  G+  +   + L  K+ +  L   +  Q +   D                 ++ Y F+L P+ ++  P +V  S  +  E        +   + +++E L+ RV +     ++ GGK  R++K+A
Sbjct:   75 NVYRDRAAERRKGGNGDMID-ADEFAHLDAEQSKFLGGDMEHTHLVKGLDYALLAQLKRE-KQKLLHATEAEKLRHQHGEASGTDRKPSEKRLTFKSRMGRLVYFHACQSSPASDAGYGHRPSVKSEQFLPGKMYYTFNLSPDEMESTPVSVQRSKEDCPEP-------DEVASGMVDEALIARV-TELMRSKKSGGKKLRKKKKA 270          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A388LVC3_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LVC3_CHABU)

HSP 1 Score: 87.0 bits (214), Expect = 2.910e-14
Identity = 63/159 (39.62%), Postives = 83/159 (52.20%), Query Frame = 0
Query:  109 YRDRADERRKGQNPDYADKLNQMASMDA-------------------ETTKYLGGDVEHTHLVKGLDYALLVKIREE-ERQQQLEALEGAGGDDRHGERGGSRAEVRARTLMGKTVLAVLRKLNLGQGAGGPDFR-RVGYEFDLEPESVQEIPTAVAHS 246
            YRDRA ERR+ QNPDY   ++++ S+ A                   E +K+LGGDVEHTHLVKGLDYALL K+R E ER++  E  +   GD +  ER      +  RT +GK+V   + K N            R  + FD++ E   EIPT V  S
Sbjct:  123 YRDRAKERREDQNPDYEQAMSELGSLHAVAPPGTTDLRTSDAHRISIENSKFLGGDVEHTHLVKGLDYALLQKVRSELERKRDGEDED--FGDKKKKERLSEEKSMTFRTALGKSVYKWIIKPNHNSKPNEMFLLGRTAFLFDMDEEFAHEIPTTVHRS 279          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A0A7R9Z3L9_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9Z3L9_9CHLO)

HSP 1 Score: 79.7 bits (195), Expect = 7.320e-14
Identity = 52/102 (50.98%), Postives = 64/102 (62.75%), Query Frame = 0
Query:  101 NDDDDLNKYRDRADERRKGQNPDYADKLNQMAS----------MDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQLEALEGAGGDDRHGERGGSRA 192
            N++DD  KYRDRA+ERR+G NPDYA   NQ+A+          +  E TKYLGGD+EHTHLVKGLD+ALL K R +     LE  + + G    GE GG  A
Sbjct:   65 NEEDDGPKYRDRAEERRRGINPDYAS-ANQLAAALPGDVDMNALSVEETKYLGGDIEHTHLVKGLDFALLQKERGK-----LERSKDSDGGPADGEGGGRTA 160          
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Match: A8JBA4_CHLRE (Predicted protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8JBA4_CHLRE)

HSP 1 Score: 79.3 bits (194), Expect = 5.040e-12
Identity = 60/146 (41.10%), Postives = 77/146 (52.74%), Query Frame = 0
Query:  108 KYRDRADERRKGQNPDYAD-KLNQMASMDAETTKYLGGDVEHTHLVKGLDYALLVKIREEERQQQLEALEGAGGDDRHGERGGSRAEVRARTLM---GKTVLAVLRKLNLGQGAGGPDFRRVGYEFDLEPESVQEIPTAVAHSLGE 249
            KYRDRA+ERR+G+N DY D     ++ +  E TKYLGGD+  THLVKGLDYALL K R E  ++     E    D+ HGE  G      ART M     T+ A  R  N+ +   GP      Y+FD E     ++PT +     E
Sbjct:   68 KYRDRAEERRRGKNSDYEDASAVDLSKLSEEETKYLGGDMRFTHLVKGLDYALLHKTRSEITKKGDSDEE----DEEHGE--GHAYPFLARTHMLMPSSTLFAPPRASNVRE-MYGPRRTAFVYDFDNEDSPDTDVPTTLRRPKSE 206          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig938.20351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L4J3_9PHAE1.690e-21674.86RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
D7FT17_ECTSI1.170e-17978.57RED_N domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A7S3XKR5_HETAK7.280e-2337.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A4D9CVF8_9STRA1.600e-1745.93RED_N domain-containing protein n=1 Tax=Nannochlor... [more]
A0A7S2W4J1_9STRA3.530e-1736.52Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A812YWK0_SYMMI3.030e-1637.35SMU2 protein n=1 Tax=Symbiodinium microadriaticum ... [more]
A0A662WVS5_9STRA5.190e-1533.50RED_N domain-containing protein (Fragment) n=2 Tax... [more]
A0A388LVC3_CHABU2.910e-1439.62Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
A0A7R9Z3L9_9CHLO7.320e-1450.98Hypothetical protein (Fragment) n=1 Tax=Chlamydomo... [more]
A8JBA4_CHLRE5.040e-1241.10Predicted protein n=1 Tax=Chlamydomonas reinhardti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012916RED-like, N-terminalPFAMPF07808RED_Ncoord: 95..132
e-value: 1.8E-4
score: 21.1
coord: 135..288
e-value: 4.5E-20
score: 72.2
NoneNo IPR availablePANTHERPTHR12765:SF5PROTEIN REDcoord: 94..544
IPR039896Protein Red-likePANTHERPTHR12765RED PROTEIN IK FACTOR CYTOKINE IKcoord: 94..544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig938contigS-firma_M_contig938:12449..18295 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig938.20351.1mRNA_S-firma_M_contig938.20351.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig938 12068..18368 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig938.20351.1 ID=prot_S-firma_M_contig938.20351.1|Name=mRNA_S-firma_M_contig938.20351.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=553bp
MSEAQLSKVSSGRDKGEMDELKKLILSEKARTKHHDGGGGGGKDRAVDGG
DVSDDDEGEGGARDRGGGGDGRGGGRPGAGGAAKDKKQKGTWRRGKLIMA
NDDDDLNKYRDRADERRKGQNPDYADKLNQMASMDAETTKYLGGDVEHTH
LVKGLDYALLVKIREEERQQQLEALEGAGGDDRHGERGGSRAEVRARTLM
GKTVLAVLRKLNLGQGAGGPDFRRVGYEFDLEPESVQEIPTAVAHSLGED
GEDEEEEEDQERHTNYLMEEGLLERVESAFTLFRQHGGKARRQRKRARDK
NGGAGGGAGNEEDAIVAALAKTGGGGDDAEDRGGVSPPPARRAKVSINIF
EDVDDRYVPAGSARSGPQPSAGAATKGYFSGLRAANAGESNAGTTTDALP
TRAEMSATVKAAARAAAARVSGDKGTHSAAGGGAGASKSGGGGGGGRDKI
ERDIFAARPSRGQALGVSAGGYDVYPETGDFETYDSDEDVTNKKDAKPGP
EGGSAAGGGGRRGGDKNQDKHPAFDKPKASFPYGVKKSEMSGRKGGGGGK
RH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039896Red-like
IPR012916RED_N