prot_S-firma_M_contig937.20340.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig937.20340.1
Unique Nameprot_S-firma_M_contig937.20340.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length702
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig937.20340.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 175..218
e-value: 2.0E-6
score: 37.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 179..212
e-value: 1.7E-6
score: 28.0
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 180..209
score: 9.677
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 175..228
e-value: 3.6E-8
score: 35.2
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 176..216

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig937contigS-firma_M_contig937:21420..24710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig937.20340.1mRNA_S-firma_M_contig937.20340.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig937 21331..25725 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig937.20340.1 ID=prot_S-firma_M_contig937.20340.1|Name=mRNA_S-firma_M_contig937.20340.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=702bp
MGHTSSTLQRAASEIIGFPSTTRPDGKSKHGEPGAGLLSENRTTFPTTLH
QATSEGETPLEGDAGLKESSGTLHQCETDGKEKRGSNDGSDESTPKTSRG
HGGLSRSLADRVESPEFTPFGGSTVREQPALVPVPVDTVTPTVPFDADFM
MRGTTRAPRIDESSDKSQTSACETPFVRKACDHCVRVKKGCDGNIPCARC
IKSNEKCNYSALRTRHDAPRGVAPPAVAGRENSQHSGGRDEEVSPARCRR
EGCSEPPLHGRRGGRPLWCQLHFVSQNSHQPLRCAVLQRTVSGEFLACWK
ETTWGWPGNAPTRCEQHKYEGQQLLELVQVVSLLRGVFAQVVWPELLERG
WREEKVRCKSPYSLWMPPNVFRGTKDFKARVDYFDTVPQVIKYCVRTEQH
HGWMMKVYQQLAQLPNPVSQAEVDIVPHKPSSCVPPRRTAGLTSTTGKLQ
PVAGGEGTGRPSGSNPRGGAAVTHQAMHLQHERRDEPQHTSPATTRGFTH
QLFSVTPSPERAEHGVNGSGNNGSLRISDSFHPANAEAWPSGMSPRVGLP
QPRPSQTHVPAYTSHRAARLRAQGLDPALVTRMGLACSEEVLAGCLSRMG
GGGGNAGGPMAALAAALRSFDGSDSGQEHDAVSASSSASKRRCSEISDPD
MYYKELKRSRDLAHQSQDLAQRAMNGQSSIVSQTQQDGVVENVETIHGEK
G*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036864Zn2-C6_fun-type_DNA-bd_sf
IPR001138Zn2-C6_fun-type_DNA-bd