prot_S-firma_M_contig936.20328.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig936.20328.1
Unique Nameprot_S-firma_M_contig936.20328.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length174
Homology
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BLAST of mRNA_S-firma_M_contig936.20328.1 vs. uniprot
Match: A0A6H5L5T7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5T7_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 1.270e-47
Identity = 99/174 (56.90%), Postives = 121/174 (69.54%), Query Frame = 0 
Query:    1 MIRRFWRRSGIPLDHIFATAARVYRRSRLRPALSRWHTSAVLETRRINRRTDAATSIQSLVRMFLARPVVGQYCRARGPAAVEASKVIQSGFRAQKARKTVAERQTRRQKREELWEVQRRNETARSKRERRAASIVIQAVWRAAVGRAEVAERARRKLGAVLVDLGGGQGRMHR 174
            MIRRFWR SG+PLDHIFATAA VYRRSRLR ALS WH+ A  ET  IN R +AA  IQ   R+F+AR    +  R RGPA + AS++IQ+ FR++KAR   A+   R+Q R+EL +    +ETA+ ++ RR AS VIQA WR A GRA    RARR L  VL +LGGG+GRMHR
Sbjct:   30 MIRRFWRSSGLPLDHIFATAAGVYRRSRLRTALSTWHSVAKAETHHINYRIEAAEVIQRATRVFIARHTAERRRRVRGPAVLAASRMIQAEFRSRKARVKTADVAVRQQNRQELRKRYWCDETAKDEQRRRDASTVIQAAWRGAAGRAAGLNRARRTLRGVLNELGGGRGRMHR 203
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig936.20328.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L5T7_9PHAE1.270e-4756.90Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..127
NoneNo IPR availableGENE3D1.20.5.190coord: 51..102
e-value: 5.8E-6
score: 28.0
IPR000048IQ motif, EF-hand binding siteSMARTSM00015iq_5coord: 80..102
e-value: 25.0
score: 10.5
coord: 129..151
e-value: 41.0
score: 8.6
coord: 49..71
e-value: 10.0
score: 13.7
IPR000048IQ motif, EF-hand binding sitePFAMPF00612IQcoord: 84..99
e-value: 0.077
score: 12.8
coord: 51..67
e-value: 0.002
score: 17.8
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 130..159
score: 6.504
IPR000048IQ motif, EF-hand binding sitePROSITEPS50096IQcoord: 50..79
score: 6.852

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig936contigS-firma_M_contig936:4254..5192 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig936.20328.1mRNA_S-firma_M_contig936.20328.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig936 4254..5192 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig936.20328.1 ID=prot_S-firma_M_contig936.20328.1|Name=mRNA_S-firma_M_contig936.20328.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=174bp
MIRRFWRRSGIPLDHIFATAARVYRRSRLRPALSRWHTSAVLETRRINRR
TDAATSIQSLVRMFLARPVVGQYCRARGPAAVEASKVIQSGFRAQKARKT
VAERQTRRQKREELWEVQRRNETARSKRERRAASIVIQAVWRAAVGRAEV
AERARRKLGAVLVDLGGGQGRMHR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000048IQ_motif_EF-hand-BS