prot_S-firma_M_contig936.20327.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig936.20327.1
Unique Name	prot_S-firma_M_contig936.20327.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	130

Homology

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BLAST of mRNA_S-firma_M_contig936.20327.1 vs. uniprot
Match: A0A6H5KQI4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQI4_9PHAE)

HSP 1 Score: 146 bits (368), Expect = 1.350e-42
Identity = 72/107 (67.29%), Postives = 93/107 (86.92%), Query Frame = 0

Query:   23 SVREAGDKVVAFVSDLLARHGWTAVLLLVVWYNCKDPAKRRYRQWKNERSIADANRPDRRAVLDRERARAVAQKQAEALEAARLVAEQKAQQKIQSYAKTQAAVKDD 129
            SV+EA D++V+FV+D+LAR+GWTA+ L++VWYNCKD  KRRY +W+N+RS+ DANRPDRRAVLDRERAR+VA+KQA+ALE AR  AE+  QQK+QSYA+T  + KDD
Sbjct:   38 SVKEASDRLVSFVADVLARYGWTAIFLVIVWYNCKDAVKRRYWKWRNKRSLDDANRPDRRAVLDRERARSVAEKQAQALEDARAAAERNTQQKMQSYARTTTSTKDD 144

[Close]

BLAST of mRNA_S-firma_M_contig936.20327.1 vs. uniprot
Match: D8LTK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTK6_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 5.470e-42
Identity = 71/107 (66.36%), Postives = 91/107 (85.05%), Query Frame = 0

Query:   23 SVREAGDKVVAFVSDLLARHGWTAVLLLVVWYNCKDPAKRRYRQWKNERSIADANRPDRRAVLDRERARAVAQKQAEALEAARLVAEQKAQQKIQSYAKTQAAVKDD 129
            S +EA D++V+FV+D+LARHGWTAV L++VWYNCKD  KR YR+W+N+RS+ DANR DRRAVLDRERAR+VA+KQA+ALE AR   E++ QQK+QSYA+T  + KDD
Sbjct:   38 SAKEASDRLVSFVADILARHGWTAVFLVIVWYNCKDAVKRHYRKWRNKRSLDDANRADRRAVLDRERARSVAEKQAQALEDARAAEERRTQQKMQSYARTTTSTKDD 144

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig936.20327.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig936.20327.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KQI4_9PHAE	1.350e-42	67.29	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LTK6_ECTSI	5.470e-42	66.36	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 91..111
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 38..56
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 57..129
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..37
None	No IPR available	TMHMM	TMhelix		coord: 38..55

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig936	contig	S-firma_M_contig936:530..2197 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig936.20327.1	mRNA_S-firma_M_contig936.20327.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig936 439..3320 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig936.20327.1 ID=prot_S-firma_M_contig936.20327.1|Name=mRNA_S-firma_M_contig936.20327.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=130bp
MDPFGGPDDDGGGGGGGGWRLGSVREAGDKVVAFVSDLLARHGWTAVLLL
VVWYNCKDPAKRRYRQWKNERSIADANRPDRRAVLDRERARAVAQKQAEA
LEAARLVAEQKAQQKIQSYAKTQAAVKDD*