prot_S-firma_M_contig9353.20321.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9353.20321.1
Unique Nameprot_S-firma_M_contig9353.20321.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length230
Homology
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 285 bits (729), Expect = 5.770e-92
Identity = 154/228 (67.54%), Postives = 186/228 (81.58%), Query Frame = 0
Query:    1 RRLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVNLLTGATLFRGRQVPSYTYSSGTASSARPPASGRQYGQAQQXXXXXXXXXSSFDMTNDPDAAEEAAVQEALRRSILDST 228
            RRLL+SPFVHGDD+HL+ NM SFLLKGV+LELTMGTQAFAGLL+F+LLASQ LM+LS+W LLVVF++PS M AC+VGFSGVLFAL YVLSRRSPG+T + GF V+ RYA WLELVLISV+V NASFLGHLCGILAG+LYVEVP VLR+VNL TG +L+  R+  SYTY+SGT+  A P  + R+  Q            +++D+ +DP+A EEAA+QEALRRS+LDST
Sbjct:  119 RRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSGRASPEGARRETRQQSPNPP------AAYDIDSDPEA-EEAALQEALRRSLLDST 339          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: F0W223_9STRA (Serine protease family S54 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W223_9STRA)

HSP 1 Score: 135 bits (340), Expect = 4.490e-35
Identity = 96/229 (41.92%), Postives = 125/229 (54.59%), Query Frame = 0
Query:    2 RLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVNLLTGATLFRGRQVPSYTYSSGTASSARPPASGRQYGQAQQXXXXXXXXXSSFDMTNDPDAAEEAAVQEALRRSILDSTGN 230
            RL+ S F HGDD+HL+ NM SFL KG  LE  MG+  FA LL + LL S  L+VL+S+ +  +   P     CS+GFS VLF L  VL+ +SP  + I GF V  +YA WLELVLI VLV +ASFLGHLCGI+AG  ++   A+ +      G TL+       + + S   S+   P +GR  G+  Q             M       E AA +EA+RR  LD   N
Sbjct:   78 RLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIYLLLVSHGLIVLASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSPNTSNIYGFQVPTKYAAWLELVLIHVLVPDASFLGHLCGIVAGYSWISHAAIGK-----KGETLY-------HKWISFIRSARHTPINGRPSGKLSQNQYAEDEK-----MARRLQEEEAAAEREAVRRRRLDRLSN 289          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 134 bits (338), Expect = 7.030e-35
Identity = 76/165 (46.06%), Postives = 100/165 (60.61%), Query Frame = 0
Query:    1 RRLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVNLLTGATLFRGRQVPS 165
            +RL++S F H DD HL+ NM S L KGV LE   GT+ F G+    L  S    V ++W +  +    S MQ C+VGFS VLFA   VL+  SP MT + G  V L+YA WLELV+IS++  NASFLGHLCGILAG++YV     + L ++ + A+       PS
Sbjct:   76 KRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYVTGGRAIMLGSIFSAASSSAPASAPS 240          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A024G5H6_9STRA (Rhomboid domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5H6_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.460e-34
Identity = 76/135 (56.30%), Postives = 91/135 (67.41%), Query Frame = 0
Query:    2 RLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAG 136
            RL+ + F HGDD+HL+ NM SFL KG  LE  MG+  FA +LA+ LL S  L+VL+S+ +L     P     CS+GFS VLF L  VL+  SP  T I GF V  +YA WLELVLI VLV NASFLGHLCGI+AG
Sbjct:   49 RLIGAAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYRFACVLAYLLLVSHGLIVLTSYLILKYQHNPHAWTQCSLGFSAVLFGLKVVLNSESPNTTSIYGFHVPTKYAAWLELVLIHVLVPNASFLGHLCGIVAG 183          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 129 bits (325), Expect = 2.030e-32
Identity = 99/235 (42.13%), Postives = 128/235 (54.47%), Query Frame = 0
Query:    2 RLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGM-TMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVNLLTGATLFRGRQVPS-----------YTYSSGTASSARPPASGRQYGQAQQXXXXXXXXXSSFDMTNDPDAAEEAAVQEALRRSI 224
            RL  S  +HGDD+HL+ NMGS L+KGV+LE TMGT AFA L+ F    S  L+V+ + A + +   P    +C VGFS VLFAL YV + R P   T +  F ++ R+A W EL+LI V+V NASFLGHLCGILAG+L+V   AV+      T A L  GR  P            YTY+ GT+ +A             +         S        DA  +A +QEALRRS+
Sbjct:   89 RLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVVA-YTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPAFAPGAASDSAAFEVEDA--DAQLQEALRRSL 319          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A7I4ESY3_PHYPA (RanBP2-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ESY3_PHYPA)

HSP 1 Score: 125 bits (315), Expect = 3.110e-31
Identity = 74/146 (50.68%), Postives = 95/146 (65.07%), Query Frame = 0
Query:    1 RRLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQA-CSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAV 145
            +RL +S F H D+ HL  NM S + KGV LE +MG+Q FAGLLA  L  S  L+V SS  L  + + P+   + C+VGFSGVLFAL  VL+  SP  T + G  V  RYA W+EL++I + V   SFLGHLCGILAG++Y+  P V
Sbjct:   33 KRLFLSAFYHVDETHLVYNMISLMWKGVQLEGSMGSQKFAGLLAVLLGLSSSLVVASSSLLAFLADSPTSFYSECAVGFSGVLFALKVVLNYNSPSHTNVYGILVPSRYAAWVELLVIQMFVPGTSFLGHLCGILAGVIYMNTPEV 178          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.310e-31
Identity = 67/144 (46.53%), Postives = 94/144 (65.28%), Query Frame = 0
Query:    2 RLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAV 145
            R++ S  +HGDD HL+ NM SFL KG  LE  +G+  F   + + LL   +L+V+ +  L   F++P  +  CSVGFSGVLFAL  +L+  SP  + + GF V  +YA WLELV+I  LV  +SF+GH+CGILAG ++V  PA+
Sbjct:   80 RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSPAM 223          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A0V0G6J9_TRIDM (Putative rhomboid-related protein 4 (Fragment) n=2 Tax=Triatominae TaxID=70999 RepID=A0A0V0G6J9_TRIDM)

HSP 1 Score: 123 bits (308), Expect = 6.340e-31
Identity = 75/169 (44.38%), Postives = 101/169 (59.76%), Query Frame = 0
Query:    1 RRLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVNLLTGA-TLFRGRQVPSYTY 168
            + LL+S F HGDD+HL+ NM SFLLKG  LE   G+  FA LL F  L +  + V     L  +    S + +C++GFSGV+FAL  + +  S G  +I G  V  +YA W EL+ I +LV NASFLGHL GI+AG+LY++ P    L  ++ GA T F G  +   TY
Sbjct:   67 KTLLLSAFEHGDDMHLYYNMISFLLKGRTLEPLYGSANFALLLGFLCLMTSSIYVSLGVLLSNMLHDSSLLYSCAIGFSGVIFALKIITTDNSSGSNLIMGIRVPTKYAAWAELIAIHILVPNASFLGHLAGIIAGVLYIKTP----LKGIIDGACTAFTGVPIYHQTY 231          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: UPI001E6740AB (rhomboid-related protein 4-like n=1 Tax=Procambarus clarkii TaxID=6728 RepID=UPI001E6740AB)

HSP 1 Score: 124 bits (312), Expect = 8.240e-31
Identity = 78/178 (43.82%), Postives = 103/178 (57.87%), Query Frame = 0
Query:    1 RRLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMT-MIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVNL--LTGATLFRGRQVPSYTYSSGTASS 175
            RRL++S   H DD+HL+ NM S +LKG +LEL  G+  F  LLA   +A+ L  V   W    +FE  S M+ C++GFSGVLFAL  + +    G +  + G  V  +YAVW+ELV+I VLV  ASF+GHL GIL G+ YV  P    +  +  L      RG   PSYTY+  T  S
Sbjct:   70 RRLVLSAIEHADDIHLYYNMASLMLKGRSLELRYGSVKFCILLAVFTIATSLTYVGLVWGATEIFETYSYMRQCAIGFSGVLFALKVLTTHYEGGASHYVHGILVPTKYAVWVELVIIQVLVPRASFIGHLAGILVGVAYVSGPLKYLIDGICGLIPVMGLRGSFAPSYTYTRSTVGS 247          
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Match: A0A813AIL7_9DINO (RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AIL7_9DINO)

HSP 1 Score: 121 bits (303), Expect = 1.590e-30
Identity = 68/146 (46.58%), Postives = 91/146 (62.33%), Query Frame = 0
Query:    2 RLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLASQLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIAGFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLR 147
            R L SPF+HGDD HL+ NM S L KGV +E  MG  +F  ++AF  + SQ L +   W  L          +C+VGFSGVLF L  +L+  SP  T++ G+ +  +YA W EL+LI ++  +ASF GHLCGILAG+LY+ V   LR
Sbjct:   61 RGLASPFLHGDDWHLYYNMASLLWKGVQIEPHMGPLSFGIMVAFLTVVSQALYIAVGWLALTGAGYGGIWSSCAVGFSGVLFGLKAILNAHSPTETVVWGWRLPTKYAAWAELLLIQLVTPHASFTGHLCGILAGLLYLVVEPTLR 206          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9353.20321.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI5.770e-9267.54Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
F0W223_9STRA4.490e-3541.92Serine protease family S54 putative n=1 Tax=Albugo... [more]
A0A7S2TY11_9EUKA7.030e-3546.06Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A024G5H6_9STRA3.460e-3456.30Rhomboid domain-containing protein n=1 Tax=Albugo ... [more]
A0A836CHG7_9STRA2.030e-3242.13Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A7I4ESY3_PHYPA3.110e-3150.68RanBP2-type domain-containing protein n=2 Tax=Phys... [more]
A0A225X2V2_9STRA4.310e-3146.53Serine protease n=1 Tax=Phytophthora megakarya Tax... [more]
A0A0V0G6J9_TRIDM6.340e-3144.38Putative rhomboid-related protein 4 (Fragment) n=2... [more]
UPI001E6740AB8.240e-3143.82rhomboid-related protein 4-like n=1 Tax=Procambaru... [more]
A0A813AIL7_9DINO1.590e-3046.58RBL14 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 2..143
e-value: 1.6E-11
score: 46.2
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 2..140
e-value: 2.1E-16
score: 60.3
NoneNo IPR availablePANTHERPTHR43066:SF1RHOMBOID-RELATED PROTEIN 4coord: 2..195
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 2..195
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 141..230
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..64
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 90..109
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..140
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 65..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..89
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 2..141
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 130..152
NoneNo IPR availableTMHMMTMhelixcoord: 104..126

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9353contigS-firma_M_contig9353:2113..3137 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9353.20321.1mRNA_S-firma_M_contig9353.20321.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9353 2113..3137 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9353.20321.1 ID=prot_S-firma_M_contig9353.20321.1|Name=mRNA_S-firma_M_contig9353.20321.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=230bp
RRLLISPFVHGDDVHLFSNMGSFLLKGVALELTMGTQAFAGLLAFALLAS
QLLMVLSSWALLVVFEIPSQMQACSVGFSGVLFALTYVLSRRSPGMTMIA
GFPVNLRYAVWLELVLISVLVSNASFLGHLCGILAGILYVEVPAVLRLVN
LLTGATLFRGRQVPSYTYSSGTASSARPPASGRQYGQAQQQQQPESSPPS
SFDMTNDPDAAEEAAVQEALRRSILDSTGN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022764Peptidase_S54_rhomboid_dom
IPR035952Rhomboid-like_sf