prot_S-firma_M_contig9345.20312.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9345.20312.1
Unique Nameprot_S-firma_M_contig9345.20312.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length205
Homology
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: D7G2T8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2T8_ECTSI)

HSP 1 Score: 207 bits (527), Expect = 3.810e-60
Identity = 115/191 (60.21%), Postives = 141/191 (73.82%), Query Frame = 0
Query:    1 LAWSRLVLAGVFIPLGTFALVVMYRWRYVLDIRTRSVHLVLMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLV 191
            LA  RL L   FI LGT+ALV  YR R++LDIRTRS HLV + G +L+ + LVTVN +  I++  D   DWFW SLLLFF++P +F SYICRALRLAVVF+P+AK  +PWLIPERN++  L++ ++G LAIPI+HE TLE  + IPKQ  IL   + V A  L CIYPFIR VDDLFNISTELI VTV +V
Sbjct:   63 LALVRLGLGCCFIVLGTYALVRFYRSRWILDIRTRSAHLVTLQGVSLLLSMLVTVNGATTIVW--DSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKSALPWLIPERNYLAVLLLASIGILAIPIYHEYTLEVWDAIPKQTSILKAQARVLAVMLVCIYPFIRNVDDLFNISTELITVTVTIV 251          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: A0A6H5JE98_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE98_9PHAE)

HSP 1 Score: 205 bits (521), Expect = 2.500e-59
Identity = 115/195 (58.97%), Postives = 141/195 (72.31%), Query Frame = 0
Query:    1 LAWSRLVLAGVFIPLGTFALVVMYRWRYVLDIRTRSVHLVLMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLSG 195
            LA  RL +   FI LGT ALV  YR +++LDIRTRS +LV++ G A +   LVTVN+S  +++  D  FDWFW SLLLFFI+P +F SYICRALRLAVVFHP+ KR +PWLIPE N+M  L+V +VG LAIPI+HE TL   + I KQ  IL   + V A  LACIYPFIR VDDLF+ISTELIIVT  +V ++ 
Sbjct:   52 LALVRLGVGCCFIVLGTCALVRFYRSKWILDIRTRSAYLVMVGGVAGILTMLVTVNDSTTVVW--DIGFDWFWISLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLIPEHNYMVVLLVASVGMLAIPIYHEYTLGVWDAISKQTNILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVTATIVLITS 244          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: D7FTW0_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW0_ECTSI)

HSP 1 Score: 200 bits (508), Expect = 2.810e-58
Identity = 111/187 (59.36%), Postives = 135/187 (72.19%), Query Frame = 0
Query:    1 LAWSRLVLAGVFIPLGTFALVVMYRWRYVLDIRTRSVHLVLMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVT 187
            LA  RL +   FI LGT AL   YR + +LDIRTRS +LV++ G A +   LVTVN++  +++  D  FDWFW+SL LFFI+P +F  YICRALRLAVVFHP+ KR +PWLIPERN+M  L+V +VG LAIPI+HE TL   + I KQ  IL   + V A  LACIYPFIR VDDLF+ISTELIIVT
Sbjct:   52 LALFRLGVGCCFIVLGTCALARFYRLKQILDIRTRSAYLVMVGGVAGILTMLVTVNDATTVIW--DTGFDWFWTSLFLFFISPALFGRYICRALRLAVVFHPRVKRALPWLIPERNYMVVLLVASVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVT 236          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: D8LJQ9_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ9_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 2.560e-57
Identity = 98/153 (64.05%), Postives = 122/153 (79.74%), Query Frame = 0
Query:   42 MAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLS 194
            MAG+++V +YL  VN+SL IL+G  Y+ DWFW SLLLF + PLVF SYICRALRLAV+FHP+AK+ +PWLIPERNH+ FL  MAV  L IPI+ + TLE  EVI KQV++LA+ ++V A  LACI+PFIR VDDLFNIS ELIIVT+L + L+
Sbjct:    1 MAGSSMVVSYLAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSAMAVALLIIPIYQDMTLEVWEVIAKQVDLLASATLVLAGTLACIFPFIRKVDDLFNISRELIIVTILFLILA 153          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: D7G2T7_ECTSI (RGS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2T7_ECTSI)

HSP 1 Score: 183 bits (465), Expect = 8.950e-52
Identity = 97/160 (60.62%), Postives = 123/160 (76.88%), Query Frame = 0
Query:   35 RSVHLVLMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLS 194
            RS HLV++ G  ++   +V VN S+ +++  D   DWFW SLLLFFI+P +  SYICRALRLAVVFHP+AKR +PWLIPERN+M  L+V++VG +AIPI+ E TLE  E+IPKQ  IL T ++VFA  LACIYPFIR VDDLFNIS EL++VTV +V L+
Sbjct:    3 RSAHLVMVEGVCVLLTMVVAVNGSINVVW--DSGLDWFWMSLLLFFISPALKGSYICRALRLAVVFHPRAKRALPWLIPERNYMVVLLVVSVGMMAIPIYQEYTLEVWEIIPKQTTILTTEALVFAVTLACIYPFIRNVDDLFNISKELLLVTVAIVCLA 160          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: D8LJQ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJQ7_ECTSI)

HSP 1 Score: 169 bits (427), Expect = 2.120e-49
Identity = 88/143 (61.54%), Postives = 109/143 (76.22%), Query Frame = 0
Query:   52 LVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLS 194
            L  VN ++ I++  D   DWFW SLLLFF++P +F SYICRALRLAVVFHPKAKR +PWLIPERN++  L+V + G LAIP++HE TLE  E+IPKQ +IL  VS+ FA   ACIYPFIR VDDLF+IS EL IVT  ++ L+
Sbjct:    2 LAAVNGAINIVW--DSGLDWFWVSLLLFFVSPALFGSYICRALRLAVVFHPKAKRALPWLIPERNYVAVLMVASCGMLAIPLYHEYTLEVWEIIPKQTDILIWVSIAFAVVQACIYPFIRNVDDLFSISKELAIVTAAVILLA 142          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: D7FTW2_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTW2_ECTSI)

HSP 1 Score: 172 bits (436), Expect = 6.080e-49
Identity = 90/147 (61.22%), Postives = 111/147 (75.51%), Query Frame = 0
Query:   41 LMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVT 187
            ++ G A +   LVTVN++  +++  D  FDWFW+SLLLFFI+P +F SYICRALRLAVVFHP+ KR +PWL+PERN+M  L+V +VG LAIPI+HE TL   + I KQ  IL   + V A  LACIYPFIR VDDLF+ISTELIIVT
Sbjct:    1 MVGGVAGILTMLVTVNDATTVIW--DTGFDWFWTSLLLFFISPALFGSYICRALRLAVVFHPRVKRALPWLVPERNYMVVLLVSSVGMLAIPIYHEHTLGVWDAISKQTTILKIEARVLAVALACIYPFIRNVDDLFSISTELIIVT 145          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: A0A6H5LEP9_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEP9_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 9.940e-49
Identity = 93/154 (60.39%), Postives = 116/154 (75.32%), Query Frame = 0
Query:   35 RSVHLVLMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTV 188
            RS HLV + G +L+ + LVTVN++  I++  D   DWFW SLLLFF++P +F SYICRALRLAVVF+P+AKR +PWLIPERN++  L++ ++G LAIPI+ E TLE  + IPKQ  IL T + V A  L CIYPFIR VDDLFNIS ELI VTV
Sbjct:   19 RSAHLVTLQGVSLLFSMLVTVNDATTIVW--DSGLDWFWISLLLFFVSPALFGSYICRALRLAVVFNPRAKRALPWLIPERNYLAVLLLASIGILAIPIYQEYTLEVWDAIPKQTSILKTQARVLAVMLVCIYPFIRNVDDLFNISKELITVTV 170          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: A0A6H5L7K1_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7K1_9PHAE)

HSP 1 Score: 141 bits (356), Expect = 2.660e-36
Identity = 77/153 (50.33%), Postives = 98/153 (64.05%), Query Frame = 0
Query:   42 MAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLS 194
            MAG+++V +Y+  VN+SL IL+G  Y+ DWFW SLLLF + PLVF SYICRALRLAV+FHP+AK+ +PWLIPERNH+ FL    V FL +PI+ + TLE                             +  VDDLFNIS ELIIVT+L + L+
Sbjct:    1 MAGSSMVVSYVAAVNQSLFILWGATYSLDWFWISLLLFSVLPLVFGSYICRALRLAVIFHPRAKQALPWLIPERNHLFFLSATVVAFLIVPIYQDMTLE-----------------------------VWKVDDLFNISRELIIVTILFLILA 124          
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Match: A0A6H5LA03_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA03_9PHAE)

HSP 1 Score: 114 bits (286), Expect = 5.170e-26
Identity = 72/161 (44.72%), Postives = 89/161 (55.28%), Query Frame = 0
Query:   35 RSVHLVLMAGAALVAAYLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVFHPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVEILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLSG 195
            RS HL ++ G A++   L  VN +L I++  D   DWFW SLLLFF++P +F S ICRALRLAVVFH +AKR +PWLIP                                    +IL   S+ FA   ACIYPFIR VDDLF+IS EL IVT   + L+G
Sbjct:  133 RSAHLAMLGGVAVILWMLTAVNGALNIVW--DSGLDWFWISLLLFFVSPALFGSCICRALRLAVVFHSRAKRALPWLIPT-----------------------------------DILIWESIAFAVVQACIYPFIRNVDDLFSISKELAIVTAATILLAG 256          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9345.20312.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
D7G2T8_ECTSI3.810e-6060.21RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JE98_9PHAE2.500e-5958.97RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FTW0_ECTSI2.810e-5859.36RGS domain-containing protein n=2 Tax=Ectocarpus s... [more]
D8LJQ9_ECTSI2.560e-5764.05Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D7G2T7_ECTSI8.950e-5260.63RGS domain-containing protein n=2 Tax=Ectocarpus T... [more]
D8LJQ7_ECTSI2.120e-4961.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTW2_ECTSI6.080e-4961.22RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LEP9_9PHAE9.940e-4960.39RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L7K1_9PHAE2.660e-3650.33RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LA03_9PHAE5.170e-2644.72RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 73..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 182..203
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..170
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..131
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 204..205
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 132..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..53
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 171..181
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..114
NoneNo IPR availableTMHMMTMhelixcoord: 177..199
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 111..133
NoneNo IPR availableTMHMMTMhelixcoord: 71..90
NoneNo IPR availableTMHMMTMhelixcoord: 148..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9345contigS-firma_M_contig9345:279..2524 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9345.20312.1mRNA_S-firma_M_contig9345.20312.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9345 279..2524 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9345.20312.1 ID=prot_S-firma_M_contig9345.20312.1|Name=mRNA_S-firma_M_contig9345.20312.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=205bp
LAWSRLVLAGVFIPLGTFALVVMYRWRYVLDIRTRSVHLVLMAGAALVAA
YLVTVNESLLILYGPDYAFDWFWSSLLLFFITPLVFVSYICRALRLAVVF
HPKAKRHMPWLIPERNHMCFLIVMAVGFLAIPIHHERTLEFLEVIPKQVE
ILATVSVVFAACLACIYPFIRGVDDLFNISTELIIVTVLLVFLSGTLTLR
LAFNV
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