prot_S-firma_M_contig934.20308.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig934.20308.1
Unique Nameprot_S-firma_M_contig934.20308.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length198
Homology
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A6H5KGW7_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGW7_9PHAE)

HSP 1 Score: 225 bits (574), Expect = 1.320e-66
Identity = 114/138 (82.61%), Postives = 122/138 (88.41%), Query Frame = 0
Query:    1 GRGGDDGG-VDSPVVEMCKRLQGPRLREADPVLQRHLAELDISPQ-----LYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSLS 132
            GRGG +GG VDSPVVEMCKRLQG R+R ADP LQ+HL+ LDISPQ     LYGMKWARLMFGREFRVE VL+LWDHIFASSWIEG+PDVPECIE VAVAMV+SIR +LLAEDCTGCLQLLMRYPPDQ VST ISLSLS
Sbjct:  309 GRGGGEGGSVDSPVVEMCKRLQGVRMRAADPELQQHLSHLDISPQAGYLKLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQDVSTAISLSLS 446          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: D7FWI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWI0_ECTSI)

HSP 1 Score: 166 bits (421), Expect = 6.910e-46
Identity = 80/89 (89.89%), Postives = 84/89 (94.38%), Query Frame = 0
Query:   44 QLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSLS 132
            QLYGMKWARLMFGREFRVE VL+LWDHIFASSWIEG+PDVPECIE VAVAMV+SIR +LLAEDCTGCLQLLMRYPPDQ VST ISLSLS
Sbjct:  140 QLYGMKWARLMFGREFRVEGVLVLWDHIFASSWIEGQPDVPECIENVAVAMVVSIRHQLLAEDCTGCLQLLMRYPPDQGVSTAISLSLS 228          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A4V5ZYV7_STECR (Rab-GAP TBC domain-containing protein n=1 Tax=Steinernema carpocapsae TaxID=34508 RepID=A0A4V5ZYV7_STECR)

HSP 1 Score: 112 bits (279), Expect = 8.300e-27
Identity = 59/126 (46.83%), Postives = 81/126 (64.29%), Query Frame = 0
Query:    6 DGGVDSPVVEMCKRLQGPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSL 131
            D G  S ++E  K +   +LRE DP L  HL +LDI+PQ+YG++W RL+FGREF +  +L LWD IFA      +P +   ++ + +AM+L IRD LLA D + CLQ LMRYPP   V + I L+L
Sbjct:   68 DTGPSSELIEKLKHIGDLQLREVDPTLWNHLNKLDIAPQIYGIRWLRLLFGREFPMPDLLCLWDAIFAD-----KPTLV-LVDFIFIAMLLQIRDLLLAGDYSMCLQYLMRYPPTVDVHSFIQLAL 187          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A158PBR0_ANGCA (Rab-GAP TBC domain-containing protein n=1 Tax=Angiostrongylus cantonensis TaxID=6313 RepID=A0A158PBR0_ANGCA)

HSP 1 Score: 109 bits (272), Expect = 1.040e-24
Identity = 59/122 (48.36%), Postives = 72/122 (59.02%), Query Frame = 0
Query:   12 PVVEMCKRLQ--GPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSL 131
            P  E+ + L   G RL   DPVL  HL   DI PQLYG++W RL+FGREF V  +L +WD I        RP +   +EC+ VAM++ IR  LL  D  GCLQ LMRYPP   VST I  +L
Sbjct:  216 PTSEIMRELSAIGQRLHAVDPVLSDHLRNFDIPPQLYGIRWLRLLFGREFAVHDLLYVWDVILCD-----RP-ISRMVECIYVAMLVQIRHLLLQSDYGGCLQYLMRYPPVMDVSTFIQQAL 331          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A0N4XH85_NIPBR (TBC1 domain family member 5 (inferred by orthology to a human protein) n=1 Tax=Nippostrongylus brasiliensis TaxID=27835 RepID=A0A0N4XH85_NIPBR)

HSP 1 Score: 110 bits (275), Expect = 1.170e-24
Identity = 58/121 (47.93%), Postives = 74/121 (61.16%), Query Frame = 0
Query:   11 SPVVEMCKRLQGPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSL 131
            SPV+     + G RL   DPVL  HL+ LDI PQLYG++W RL+FGREF +  +L +WD +     +  RP +P  +EC+ VAM+  IR  LL  D  GCLQ LMRYPP   VS  I  +L
Sbjct:  255 SPVMRELSAI-GERLHSVDPVLAEHLSNLDIPPQLYGIRWLRLLFGREFSIHDLLYVWDVL-----LSDRP-IPRMVECIFVAMLEQIRHLLLQSDYGGCLQYLMRYPPIVDVSAFIQQAL 368          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A397GIP1_9GLOM (Rab-GAP TBC domain-containing protein n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397GIP1_9GLOM)

HSP 1 Score: 108 bits (270), Expect = 6.990e-24
Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = 0
Query:   11 SPVVEMCKRLQGPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVIS 128
            +PVV  C ++    L++ DP L  HL  L+I PQLYG++W RL+FGREF +E VL+LWD +FA       P +   ++ V + M+L IRDELL  D  GCL  LMRYPP   V  ++S
Sbjct:  259 TPVVMRCNKIYEEYLQKIDPDLFLHLNNLEIEPQLYGIRWVRLLFGREFTLEKVLILWDGMFAED-----PTL-RIVDFVCLTMMLLIRDELLESDYAGCLSKLMRYPPIDEVELLVS 370          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A2A6BBS0_PRIPA (Rbg-3 n=2 Tax=Pristionchus pacificus TaxID=54126 RepID=A0A2A6BBS0_PRIPA)

HSP 1 Score: 108 bits (270), Expect = 7.600e-24
Identity = 61/149 (40.94%), Postives = 85/149 (57.05%), Query Frame = 0
Query:    5 DDGGVDSPVVEMCKRLQGP----------------------RLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSL 131
            +DGG  SP  E    LQ P                      RL+E DP L +HL+ LDI PQLYG++W RL+FGREF +  +L +WD +F+    + RP +   ++C+AV M++ +R  LL+ D +GCLQ LMRYPP   V+T + L L
Sbjct:  252 EDGG--SPTTETVSLLQQPFMRVQDGPPTSRLMDELTAINARLQEVDPTLHKHLSSLDIPPQLYGIRWLRLLFGREFPLHDLLFIWDVLFS----QQRP-LHRFVQCMAVVMLVHVRSLLLSCDYSGCLQYLMRYPPVADVTTFVRLVL 393          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A3P7IE08_STRVU (Rab-GAP TBC domain-containing protein (Fragment) n=1 Tax=Strongylus vulgaris TaxID=40348 RepID=A0A3P7IE08_STRVU)

HSP 1 Score: 105 bits (261), Expect = 8.950e-24
Identity = 54/123 (43.90%), Postives = 74/123 (60.16%), Query Frame = 0
Query:   11 SPVVEMCKRLQ--GPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSL 131
            +P   + + L   G RL   DP+L  HL+ LDI PQLYG++W RL+FGREF +  +L +WD +        RP +   +EC+ +AM++ IR  LL  D  GCLQ LMRYPP   V+T I  +L
Sbjct:  113 TPTSHIMRELVVIGERLHSVDPILADHLSHLDIPPQLYGIRWLRLLFGREFSIHDLLYVWDVLLCD-----RP-MERMVECIFIAMLIQIRHLLLQSDYGGCLQYLMRYPPVVDVTTFIQQAL 229          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A0D8XHJ9_DICVI (Rab-GAP TBC domain-containing protein n=1 Tax=Dictyocaulus viviparus TaxID=29172 RepID=A0A0D8XHJ9_DICVI)

HSP 1 Score: 107 bits (268), Expect = 9.670e-24
Identity = 57/119 (47.90%), Postives = 75/119 (63.03%), Query Frame = 0
Query:   11 SPVVEMCKRLQ--GPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVI 127
            +P  ++ + L   G +L E D VL  HL +LDI PQLYG++W RL+FGREF +  +L +WD I +      RP V E +EC+ VAM++ IRD LL  D +G LQ LMRYPP   VS  I
Sbjct:  249 APTSQIMRDLTAIGQKLHEVDAVLSNHLRDLDIPPQLYGIRWLRLLFGREFAIHDLLYIWDVILSE-----RP-VSEMVECMFVAMLIQIRDLLLESDYSGSLQYLMRYPPIVDVSAFI 361          
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Match: A0A7S4MSZ1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4MSZ1_9EUKA)

HSP 1 Score: 106 bits (264), Expect = 1.270e-23
Identity = 50/121 (41.32%), Postives = 78/121 (64.46%), Query Frame = 0
Query:   11 SPVVEMCKRLQGPRLREADPVLQRHLAELDISPQLYGMKWARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRDELLAEDCTGCLQLLMRYPPDQSVSTVISLSL 131
            SPVV+ CK++Q   L++ DP+L   L ++ I PQ+Y ++W RL+F REF ++ VL +WD +FA           + IE + +AMVL +RD+LL  D +GCL+ L+ YPP + V+  I+ +L
Sbjct:  236 SPVVQKCKKVQDIMLKKEDPILHSFLTDIGIEPQIYALRWIRLLFSREFHLDDVLTIWDAVFAYG------QELKLIEYICLAMVLYLRDQLLEMDNSGCLRRLLNYPPVEDVTIFITSAL 350          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig934.20308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGW7_9PHAE1.320e-6682.61Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
D7FWI0_ECTSI6.910e-4689.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A4V5ZYV7_STECR8.300e-2746.83Rab-GAP TBC domain-containing protein n=1 Tax=Stei... [more]
A0A158PBR0_ANGCA1.040e-2448.36Rab-GAP TBC domain-containing protein n=1 Tax=Angi... [more]
A0A0N4XH85_NIPBR1.170e-2447.93TBC1 domain family member 5 (inferred by orthology... [more]
A0A397GIP1_9GLOM6.990e-2446.61Rab-GAP TBC domain-containing protein n=1 Tax=Dive... [more]
A0A2A6BBS0_PRIPA7.600e-2440.94Rbg-3 n=2 Tax=Pristionchus pacificus TaxID=54126 R... [more]
A0A3P7IE08_STRVU8.950e-2443.90Rab-GAP TBC domain-containing protein (Fragment) n... [more]
A0A0D8XHJ9_DICVI9.670e-2447.90Rab-GAP TBC domain-containing protein n=1 Tax=Dict... [more]
A0A7S4MSZ1_9EUKA1.270e-2341.32Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000195Rab-GTPase-TBC domainPFAMPF00566RabGAP-TBCcoord: 25..102
e-value: 2.7E-9
score: 37.0
IPR000195Rab-GTPase-TBC domainPROSITEPS50086TBC_RABGAPcoord: 1..75
score: 13.08
NoneNo IPR availableGENE3D1.10.472.80coord: 12..140
e-value: 3.5E-28
score: 100.1
NoneNo IPR availablePANTHERPTHR22957TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEINcoord: 24..127
NoneNo IPR availablePANTHERPTHR22957:SF521coord: 24..127
IPR035969Rab-GTPase-TBC domain superfamilySUPERFAMILY47923Ypt/Rab-GAP domain of gyp1pcoord: 19..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig934contigS-firma_M_contig934:24101..25772 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig934.20308.1mRNA_S-firma_M_contig934.20308.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig934 24101..25773 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig934.20308.1 ID=prot_S-firma_M_contig934.20308.1|Name=mRNA_S-firma_M_contig934.20308.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=198bp
GRGGDDGGVDSPVVEMCKRLQGPRLREADPVLQRHLAELDISPQLYGMKW
ARLMFGREFRVESVLLLWDHIFASSWIEGRPDVPECIECVAVAMVLSIRD
ELLAEDCTGCLQLLMRYPPDQSVSTVISLSLSPRGSSSSSSSQELPPELL
QSQSPARHSSAALTFGAVGAGAGAGAPVEDQPWLNNGEGGRDVGVGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035969Rab-GTPase_TBC_sf
IPR000195Rab-GTPase-TBC_dom