prot_S-firma_M_contig934.20305.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig934.20305.1
Unique Nameprot_S-firma_M_contig934.20305.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length231
Homology
[Close]
BLAST of mRNA_S-firma_M_contig934.20305.1 vs. uniprot
Match: A0A6H5JY73_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY73_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 1.060e-36
Identity = 94/198 (47.47%), Postives = 116/198 (58.59%), Query Frame = 0 
Query:   66 QLHAPAPRFTIRPPSRLLNGKYTQRERCSPPP------NLVGLTSSSSFESSS-----------AYGTQGISGSDSDASMDAEVASLTSGRRLGNGVEGLLRMVDAPSRPRACQPRIRDAESAVSLFALL------TPSPIEHRETHRGTQP----------------AAAGGDNPPAEQGGGVWGVEPEAKRRRICS 224
            Q H P PR+TIRPPSR  +GK+T R+ CSPP       N+V  +S+  F               A G    SGSDSDASMDAEVASLTSGRRLG+GVEGL+RMV+AP++    +PRIRDAESAV+LFALL      TPSP++ R   + T+                   AGG     E+G  +W  EPEAKR+R+ S
Sbjct:   10 QAHRPPPRYTIRPPSRSFDGKFTLRQ-CSPPSVAELHANVVSSSSNFDFXXXXXXXXXXXXXXXARGLAACSGSDSDASMDAEVASLTSGRRLGSGVEGLVRMVNAPTKLPRAEPRIRDAESAVALFALLSPSTHITPSPVQGRHQQQTTKQQLDHLGDCGRSSWDTETGAGG-----EKGDEIWVHEPEAKRQRVAS 201
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig934.20305.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JY73_9PHAE1.060e-3647.47Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig934contigS-firma_M_contig934:14336..15028 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig934.20305.1mRNA_S-firma_M_contig934.20305.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig934 14336..15028 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig934.20305.1 ID=prot_S-firma_M_contig934.20305.1|Name=mRNA_S-firma_M_contig934.20305.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=231bp
MERTRPSATSWDTRAFVHQPLDTTAVCRRSPAPSRASPNQQPHQQTPGAA
PAAAAAAAATARPATQLHAPAPRFTIRPPSRLLNGKYTQRERCSPPPNLV
GLTSSSSFESSSAYGTQGISGSDSDASMDAEVASLTSGRRLGNGVEGLLR
MVDAPSRPRACQPRIRDAESAVSLFALLTPSPIEHRETHRGTQPAAAGGD
NPPAEQGGGVWGVEPEAKRRRICSSKVPDS*
back to top