prot_S-firma_M_contig9330.20297.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9330.20297.1
Unique Nameprot_S-firma_M_contig9330.20297.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length93
Homology
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BLAST of mRNA_S-firma_M_contig9330.20297.1 vs. uniprot
Match: D8LD17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD17_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 6.220e-26
Identity = 59/85 (69.41%), Postives = 60/85 (70.59%), Query Frame = 0 
Query:   18 PPADEREHGARIRDMVMKAAHVGYVEEDEERGGGEDA---------AAWRTPLASVDSLSRQLKDTWENFNANLAAMGAETARTG 93
            PP  EREHGARIRDMVMKAAHVGYVEEDE  GG             AAWRTPLASVDSLSRQLKDTWE FNAN A M  E+   G
Sbjct:  691 PPVGEREHGARIRDMVMKAAHVGYVEEDE--GGXXXXXXXXXXXXQAAWRTPLASVDSLSRQLKDTWETFNANFATMAGESREDG 773
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BLAST of mRNA_S-firma_M_contig9330.20297.1 vs. uniprot
Match: A0A6H5KXC9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXC9_9PHAE)

HSP 1 Score: 109 bits (273), Expect = 6.270e-26
Identity = 59/83 (71.08%), Postives = 60/83 (72.29%), Query Frame = 0 
Query:   18 PPADEREHGARIRDMVMKAAHVGYVEEDEERGGGEDA-------AAWRTPLASVDSLSRQLKDTWENFNANLAAMGAETARTG 93
            PP  EREHGARIRDMVMKAAHVGYVEEDE  GG           AAWRTPLASVDSLSRQLKDTWE FNAN A M  E+   G
Sbjct:  854 PPVGEREHGARIRDMVMKAAHVGYVEEDE--GGXXXXXXXXXXQAAWRTPLASVDSLSRQLKDTWETFNANFATMAGESRGEG 934
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9330.20297.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LD17_ECTSI6.220e-2669.41Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KXC9_9PHAE6.270e-2671.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9330contigS-firma_M_contig9330:148..426 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9330.20297.1mRNA_S-firma_M_contig9330.20297.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9330 148..426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9330.20297.1 ID=prot_S-firma_M_contig9330.20297.1|Name=mRNA_S-firma_M_contig9330.20297.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=93bp
GGRTAGAAGAAAAGRRKPPADEREHGARIRDMVMKAAHVGYVEEDEERGG
GEDAAAWRTPLASVDSLSRQLKDTWENFNANLAAMGAETARTG
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