prot_S-firma_M_contig9326.20286.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9326.20286.1
Unique Nameprot_S-firma_M_contig9326.20286.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length171
Homology
BLAST of mRNA_S-firma_M_contig9326.20286.1 vs. uniprot
Match: D8LR89_ECTSI (BTB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR89_ECTSI)

HSP 1 Score: 162 bits (410), Expect = 1.280e-43
Identity = 80/94 (85.11%), Postives = 85/94 (90.43%), Query Frame = 0
Query:    1 NEFSQGPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKKHTLLTEHQDAVSALAVVNGKLVSGSLSPMWGVSVWDPQSWTTERTLS 94
            +E ++GPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFK+HTLL EHQDAVSALAVVNGKLVSGS      + VWDPQSWTTERTLS
Sbjct:  339 HEATKGPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKQHTLLKEHQDAVSALAVVNGKLVSGSWDT--SIKVWDPQSWTTERTLS 430          
BLAST of mRNA_S-firma_M_contig9326.20286.1 vs. uniprot
Match: A0A6H5LQ32_9PHAE (BTB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ32_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 5.380e-42
Identity = 78/90 (86.67%), Postives = 81/90 (90.00%), Query Frame = 0
Query:    5 QGPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKKHTLLTEHQDAVSALAVVNGKLVSGSLSPMWGVSVWDPQSWTTERTLS 94
            QG ECQKLIAEAWEHHALKA+GREGLTGTPRTKQRRRSCSFK+HTLL EHQDAVSALAVVNGKLVSGS      + VWDPQSWTTERTLS
Sbjct:  424 QGSECQKLIAEAWEHHALKAIGREGLTGTPRTKQRRRSCSFKQHTLLKEHQDAVSALAVVNGKLVSGSWDT--SIKVWDPQSWTTERTLS 511          
BLAST of mRNA_S-firma_M_contig9326.20286.1 vs. uniprot
Match: A0A835YJQ3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJQ3_9STRA)

HSP 1 Score: 108 bits (269), Expect = 3.440e-24
Identity = 56/92 (60.87%), Postives = 64/92 (69.57%), Query Frame = 0
Query:    5 QGPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKKHTLLTEHQDAVSALAVVNGKLVSGSLSPMWG--VSVWDPQSWTTERTLS 94
            Q PEC  L+ EAWEH AL A GR G T + RT+ RRRSCSF+ HTLL EH DAVSALA+V  KLVSGS    W   + VWD ++W  ERTLS
Sbjct:  303 QRPECSALLTEAWEHKALVASGRAGFTDSARTRPRRRSCSFQNHTLLMEHSDAVSALAIVADKLVSGS----WDLTIKVWDTKTWLCERTLS 390          
BLAST of mRNA_S-firma_M_contig9326.20286.1 vs. uniprot
Match: A0A4Q6B0L6_9SPHI (BACK domain-containing protein n=1 Tax=Sphingobacteriales bacterium TaxID=2044944 RepID=A0A4Q6B0L6_9SPHI)

HSP 1 Score: 66.2 bits (160), Expect = 5.460e-10
Identity = 35/66 (53.03%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    7 PECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKKHTLLTEHQDAVSALAVVNGKLVSGS 72
            P+   L+ EA+EHHAL A GR G++   RT++RR SC+F + ++L  H+DAVSAL VV   LVSGS
Sbjct:  123 PQRLSLLLEAFEHHALLACGRAGVSSV-RTRRRRLSCAFSQQSVLDGHEDAVSALVVVRDYLVSGS 187          
BLAST of mRNA_S-firma_M_contig9326.20286.1 vs. uniprot
Match: A0A7S2SQG6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQG6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 5.630e-8
Identity = 38/92 (41.30%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    5 QGPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKKHTL-LTEHQDAVSALAVVNGKLVSGSLSPMWGVSV--WDPQSWTTERTL 93
            Q    + L++EA+EH AL A GR     T R++ RRRS  +   +L L  H D+VSAL V +G+LVSGS    W +++  WD  + + ERT+
Sbjct:  276 QSETAKALLSEAFEHQALVAAGRPSGVDTTRSRPRRRSKKWTGESLTLQGHSDSVSALTVCHGRLVSGS----WDMTICIWDSDTLSIERTI 363          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9326.20286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LR89_ECTSI1.280e-4385.11BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5LQ32_9PHAE5.380e-4286.67BTB domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A835YJQ3_9STRA3.440e-2460.87WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A4Q6B0L6_9SPHI5.460e-1053.03BACK domain-containing protein n=1 Tax=Sphingobact... [more]
A0A7S2SQG6_9STRA5.630e-841.30Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020472G-protein beta WD-40 repeatPRINTSPR00320GPROTEINBRPTcoord: 150..164
score: 43.84
coord: 110..124
score: 41.52
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 86..123
e-value: 1.6E-5
score: 34.4
coord: 44..83
e-value: 8.9
score: 11.0
coord: 126..163
e-value: 4.9E-5
score: 32.7
IPR001680WD40 repeatPFAMPF00400WD40coord: 128..163
e-value: 6.0E-5
score: 23.7
coord: 89..123
e-value: 1.2E-4
score: 22.8
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 93..132
score: 10.642
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 133..163
score: 10.174
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 31..171
e-value: 1.7E-27
score: 97.9
IPR033510PLAA/Doa1/Lub1PANTHERPTHR19849PHOSPHOLIPASE A-2-ACTIVATING PROTEINcoord: 47..169
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 150..164
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 110..124
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 51..171
score: 20.013
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 44..169

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9326contigS-firma_M_contig9326:416..2736 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9326.20286.1mRNA_S-firma_M_contig9326.20286.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9326 416..2736 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9326.20286.1 ID=prot_S-firma_M_contig9326.20286.1|Name=mRNA_S-firma_M_contig9326.20286.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=171bp
NEFSQGPECQKLIAEAWEHHALKAVGREGLTGTPRTKQRRRSCSFKKHTL
LTEHQDAVSALAVVNGKLVSGSLSPMWGVSVWDPQSWTTERTLSDHTGPV
RCFAQCAGRLLSGSDDSTIKVWNTDTWSVVRSLDDHTDVVNALTDCEGRL
ASGSDDGTIKLWNTANWQCEV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036322WD40_repeat_dom_sf
IPR017986WD40_repeat_dom
IPR019775WD40_repeat_CS
IPR033510PLAA/Doa1/Lub1
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR001680WD40_repeat
IPR020472G-protein_beta_WD-40_rep