prot_S-firma_M_contig932.20279.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig932.20279.1
Unique Nameprot_S-firma_M_contig932.20279.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length129
Homology
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BLAST of mRNA_S-firma_M_contig932.20279.1 vs. uniprot
Match: D7FYZ5_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ5_ECTSI)

HSP 1 Score: 122 bits (307), Expect = 4.170e-30
Identity = 66/93 (70.97%), Postives = 74/93 (79.57%), Query Frame = 0 
Query:    4 REVAAFRDSVMYPIEADVDAQFREFLRLVDMFVKSDSSYEVNISCRARTEVTRYCKEASFKELDAGDKADIFTPAETQTSNMLADNLLAKFQA 96
            REVAAFRDS+ Y +EAD DA F+EF+ +V+ F+KS SSYEVNI CRART V R   EA FKELD   +ADIFT AETQTS MLADNLLAKFQA
Sbjct:  418 REVAAFRDSI-YAVEADDDALFKEFVAIVNKFIKSGSSYEVNIDCRARTGVMRDVDEARFKELDTDGRADIFTLAETQTSQMLADNLLAKFQA 509
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig932.20279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYZ5_ECTSI4.170e-3070.97RGS domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.58.1850coord: 1..100
e-value: 1.8E-7
score: 32.8
IPR036305RGS domain superfamilySUPERFAMILY48097Regulator of G-protein signaling, RGScoord: 20..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig932contigS-firma_M_contig932:9287..10053 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig932.20279.1mRNA_S-firma_M_contig932.20279.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig932 9068..11321 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig932.20279.1 ID=prot_S-firma_M_contig932.20279.1|Name=mRNA_S-firma_M_contig932.20279.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=129bp
MFRREVAAFRDSVMYPIEADVDAQFREFLRLVDMFVKSDSSYEVNISCRA
RTEVTRYCKEASFKELDAGDKADIFTPAETQTSNMLADNLLAKFQANGDV
SAHQRRSLGHSVDQRDSGGTVLMHKRTH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036305RGS_sf