prot_S-firma_M_contig9315.20272.1 (polypeptide) Sphaerotrichia firma Sfir_13m male
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Overview
Homology
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: D8LGZ7_ECTSI (DNA-directed RNA polymerase (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGZ7_ECTSI) HSP 1 Score: 392 bits (1008), Expect = 3.210e-127 Identity = 193/209 (92.34%), Postives = 196/209 (93.78%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIAGKGSAPAAVARLKFCNVKPGSGSGLSGLPAGEGGAATKLHE 209
MCRPVLHL SGRMEWIGPM QQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRD+AGKG+ PAAVARLKFCNVKPGS + AG AATKLHE
Sbjct: 596 MCRPVLHLQSGRMEWIGPMAQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDVAGKGAGPAAVARLKFCNVKPGS------VGAGGAAAATKLHE 798
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A7S2EG60_TRICV (DNA-directed RNA polymerase (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EG60_TRICV) HSP 1 Score: 262 bits (670), Expect = 2.950e-86 Identity = 125/168 (74.40%), Postives = 146/168 (86.90%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIA 168
+ RPVL +GR E+IGPMEQ FM+IACL +DVR G+TTH ELDPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAH L P+R DNK+Y++ PQA +VQT RHGE+++D+YP GTNAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT + L++ A
Sbjct: 39 VVRPVLQRSTGRTEYIGPMEQPFMDIACLPEDVREGVTTHMELDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHSL-PNRPDNKLYRLQNPQAPVVQTARHGEFRMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTVKMTLKEAA 205
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A835YVF9_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVF9_9STRA) HSP 1 Score: 283 bits (723), Expect = 3.030e-85 Identity = 131/185 (70.81%), Postives = 155/185 (83.78%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIAGKGSAPAAVARLKFCNV 185
M RPVL++ + EWIGP+EQ FMEIACLA + + TH E+DPTNMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCL PH+TDNKMY++LFPQA +V TRRH E+Q+D+YPQGTNAVVAVISYTGFDMEDAMILNKS+FERGF HASV+KT +DL+D+ K + V +++F N
Sbjct: 632 MIRPVLNIEFCKREWIGPLEQPFMEIACLASEAKGTGATHCEIDPTNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLYPHKTDNKMYRILFPQAPLVMTRRHREFQMDNYPQGTNAVVAVISYTGFDMEDAMILNKSAFERGFAHASVVKTIKIDLKDLLTKSDSKTMVGKMRFTNT 816
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A7R9U7R0_9STRA (DNA-directed RNA polymerase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U7R0_9STRA) HSP 1 Score: 266 bits (679), Expect = 8.990e-83 Identity = 134/189 (70.90%), Postives = 153/189 (80.95%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIAGKGSA--PAAVARLKFCNVKP 187
M RPVL SGR+E IGP+EQ +E+ACL ++V G TTH+ELDPTNMLSL+ASLTPFSD NQSPRNMYQCQMGKQTMGTPAHC+ PHRTDNKMYK+ PQA IVQTRRH EYQLD+YPQGTNAVVAVISYTGFDMEDAMILNK+SFERGF HAS+ KT ++L D K ++ L+F N +P
Sbjct: 40 MVRPVLQRASGRIELIGPLEQTHLEVACLPEEVHEG-TTHQELDPTNMLSLIASLTPFSDQNQSPRNMYQCQMGKQTMGTPAHCM-PHRTDNKMYKIQTPQAPIVQTRRHAEYQLDEYPQGTNAVVAVISYTGFDMEDAMILNKASFERGFAHASIYKTKIINLDDEEEKAASLEDGTKPTLRFGNTRP 226
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A6U3PLE0_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PLE0_9STRA) HSP 1 Score: 273 bits (699), Expect = 1.400e-81 Identity = 134/187 (71.66%), Postives = 155/187 (82.89%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIA---GKGSAPAAVARLKFCN 184
+ RPVLH +G E IGPMEQ F++IACL D+R G+TTH+ELDPTNMLSL++SLTPFSDYNQSPRNMYQCQMGKQTMGTP H L PHRTDNK+Y++ PQA +VQT RHGEY++D+YP GTNAVVAV+SYTGFDMEDAMILNKSSFERGFGHASV KT VDLR+ A G +A +R+KF N
Sbjct: 709 LVRPVLHRSTGCAELIGPMEQPFLDIACLPQDIREGITTHQELDPTNMLSLISSLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PHRTDNKLYRLQNPQAPVVQTSRHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSFERGFGHASVYKTMQVDLREEAERRGSSTASGEKSRVKFGN 894
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A7S3V7B4_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V7B4_9STRA) HSP 1 Score: 273 bits (698), Expect = 1.590e-81 Identity = 136/190 (71.58%), Postives = 156/190 (82.11%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIAG------KGSAPAAVARLKFCN 184
+ RPVLH SG+ E IGPMEQ FM+IACLA+DVR G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H L PHRTDNK+Y++ PQAAI QT RHG+Y++D+YP GTNAVVAV+SYTGFDMEDAMILNKS++ERGFGHASV KT VD++D A KG P R+KF N
Sbjct: 683 LVRPVLHRASGKEEMIGPMEQPFMDIACLAEDVREGITTHQELDPMNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PHRTDNKLYRLQNPQAAIAQTARHGKYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSAYERGFGHASVYKTMKVDIKDEAERAGSDTKGDKP----RMKFGN 867
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A7S4JAV2_9STRA (DNA-directed RNA polymerase subunit beta n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JAV2_9STRA) HSP 1 Score: 271 bits (693), Expect = 9.760e-81 Identity = 135/191 (70.68%), Postives = 153/191 (80.10%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRDIA------GKGSAPAAVARLKFCNV 185
+ RPVLH +GR E IGPMEQ FM+IACL +DVR G+TTH ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H L P+R DNK+Y++ PQA +VQT RHG + +D+YP GTNAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT VDLRD A G G + ARLKF N+
Sbjct: 705 VVRPVLHRRTGRTERIGPMEQPFMDIACLREDVREGITTHMELDPNNMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPVHSL-PYRPDNKLYRLQNPQAPVVQTARHGAFNMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTMTVDLRDKAEHMGAKGGGCDGSGEARLKFSNI 894
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: A0A7S0CJA4_9STRA (DNA-directed RNA polymerase (Fragment) n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CJA4_9STRA) HSP 1 Score: 254 bits (650), Expect = 2.270e-79 Identity = 124/190 (65.26%), Postives = 154/190 (81.05%), Query Frame = 0
Query: 3 RPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRD---IAGKGSAPAAVARLKFCNVKPGS 189
RPVLH +G++E IGPMEQ F+ IACL +DV G+TTH ELDPTN+L L++ +TPFSDYNQSPRNMYQCQMGKQTMGTPAH L PHR DNK+Y++ PQA IVQT +H Y++D+YP GTNAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT V++ + + +G + ++ R++F N+KP S
Sbjct: 68 RPVLHRATGKVELIGPMEQPFLTIACLPEDVSEGITTHMELDPTNILDLISGMTPFSDYNQSPRNMYQCQMGKQTMGTPAHSL-PHRPDNKLYRLQNPQAPIVQTAKHSLYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTKIVEVEEEGKMLSEGKSESS--RIRFSNLKPAS 254
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: K0RK47_THAOC (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RK47_THAOC) HSP 1 Score: 261 bits (668), Expect = 8.270e-79 Identity = 123/166 (74.10%), Postives = 144/166 (86.75%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDLRD 166
+ RPVL +GR E+IGPMEQ FM+IACL +D+R G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H L P+R+DNK+YK+ PQA +VQT HGEY++D+YP GTNAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT VD+ +
Sbjct: 290 VVRPVLQRATGRTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPGHSL-PYRSDNKLYKIQTPQAPLVQTAVHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTVKVDIAE 454
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Match: B8CA95_THAPS (DNA-directed RNA polymerase subunit beta n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CA95_THAPS) HSP 1 Score: 259 bits (663), Expect = 3.710e-77 Identity = 123/164 (75.00%), Postives = 141/164 (85.98%), Query Frame = 0
Query: 1 MCRPVLHLHSGRMEWIGPMEQQFMEIACLADDVRPGLTTHRELDPTNMLSLVASLTPFSDYNQSPRNMYQCQMGKQTMGTPAHCLTPHRTDNKMYKVLFPQAAIVQTRRHGEYQLDDYPQGTNAVVAVISYTGFDMEDAMILNKSSFERGFGHASVLKTFAVDL 164
+ RPVL +GR E+IGPMEQ FM+IACL +D+R G+TTH+ELDP NMLSL+ASLTPFSDYNQSPRNMYQCQMGKQTMGTP H L P+R DNKMYK+ PQA +VQT HGEY++D+YP GTNAVVAV+SYTGFDMEDAMILNKSS+ERGFGHASV KT + L
Sbjct: 525 VVRPVLQRATGRTEYIGPMEQPFMDIACLPEDIREGITTHQELDPANMLSLIASLTPFSDYNQSPRNMYQCQMGKQTMGTPCHSL-PYRADNKMYKIQTPQAPLVQTAVHGEYKMDEYPNGTNAVVAVLSYTGFDMEDAMILNKSSYERGFGHASVYKTIKIRL 687 The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9315.20272.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_S-firma_M_contig9315.20272.1 ID=prot_S-firma_M_contig9315.20272.1|Name=mRNA_S-firma_M_contig9315.20272.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=209bpback to top |