prot_S-firma_M_contig9286.20235.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9286.20235.1
Unique Nameprot_S-firma_M_contig9286.20235.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length51
Homology
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: D7FX43_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX43_ECTSI)

HSP 1 Score: 105 bits (261), Expect = 4.180e-25
Identity = 50/50 (100.00%), Postives = 50/50 (100.00%), Query Frame = 0
Query:    1 KDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK 50
            KDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK
Sbjct:  244 KDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK 293          
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: A0A6H5K4A0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A0_9PHAE)

HSP 1 Score: 81.6 bits (200), Expect = 4.130e-19
Identity = 37/37 (100.00%), Postives = 37/37 (100.00%), Query Frame = 0
Query:   14 MKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK 50
            MKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK
Sbjct:    1 MKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK 37          
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: A0A835ZF02_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF02_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 3.090e-17
Identity = 36/50 (72.00%), Postives = 45/50 (90.00%), Query Frame = 0
Query:    1 KDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK 50
            KD+++TR  YKD+MK++AFD+I+H+A NCDLH TVT RAKELFAGWRNVK
Sbjct:  152 KDDKRTRVGYKDQMKKQAFDVIDHMAANCDLHGTVTERAKELFAGWRNVK 201          
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: A0A7S4A3Y9_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A3Y9_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 6.050e-11
Identity = 30/47 (63.83%), Postives = 39/47 (82.98%), Query Frame = 0
Query:    2 DERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRN 48
            DERKTRT YKD+MK++AFDLI H A N +LH++V  RA+ELFA +R+
Sbjct:  183 DERKTRTGYKDQMKKKAFDLIAHAASNLNLHDSVVGRAQELFANYRD 229          
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: A0A1E7FCZ9_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCZ9_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 6.380e-7
Identity = 25/48 (52.08%), Postives = 33/48 (68.75%), Query Frame = 0
Query:    1 KDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRN 48
            K +R+TRT YKDK K++AF  + H+     LHE V  R KELFAG+R+
Sbjct:  410 KGDRRTRTGYKDKQKKDAFVQMAHVGDALSLHEAVVQRGKELFAGFRD 457          
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: A0A7S2P7B7_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P7B7_9STRA)

HSP 1 Score: 52.4 bits (124), Expect = 1.630e-6
Identity = 24/46 (52.17%), Postives = 33/46 (71.74%), Query Frame = 0
Query:    3 ERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRN 48
            ERKTRT YKDK K++AF  + H+     LHE++   AKELF+G+R+
Sbjct:  349 ERKTRTGYKDKQKKDAFMQMQHVGYALSLHESIVQYAKELFSGFRD 394          
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Match: A0A7S2WW70_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WW70_9STRA)

HSP 1 Score: 52.0 bits (123), Expect = 2.230e-6
Identity = 24/47 (51.06%), Postives = 33/47 (70.21%), Query Frame = 0
Query:    2 DERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRN 48
            D+RKTR  YKD  KR+AF  + H+A N DLH+ V  RA++LF  +R+
Sbjct:  290 DQRKTREWYKDNHKRKAFQEMEHVASNLDLHQQVKTRAEDLFVYFRD 336          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9286.20235.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FX43_ECTSI4.180e-25100.00C2H2 zinc finger protein n=1 Tax=Ectocarpus silicu... [more]
A0A6H5K4A0_9PHAE4.130e-19100.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A835ZF02_9STRA3.090e-1772.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4A3Y9_9STRA6.050e-1163.83Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A1E7FCZ9_9STRA6.380e-752.08Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
A0A7S2P7B7_9STRA1.630e-652.17Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
A0A7S2WW70_9STRA2.230e-651.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9286contigS-firma_M_contig9286:149..301 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9286.20235.1mRNA_S-firma_M_contig9286.20235.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9286 149..301 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9286.20235.1 ID=prot_S-firma_M_contig9286.20235.1|Name=mRNA_S-firma_M_contig9286.20235.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=51bp
KDERKTRTAYKDKMKREAFDLINHIAGNCDLHETVTVRAKELFAGWRNVK
*
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