prot_S-firma_M_contig9275.20222.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9275.20222.1
Unique Nameprot_S-firma_M_contig9275.20222.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length343
Homology
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BLAST of mRNA_S-firma_M_contig9275.20222.1 vs. uniprot
Match: A0A6H5L5Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Y8_9PHAE)

HSP 1 Score: 462 bits (1190), Expect = 2.000e-153
Identity = 238/357 (66.67%), Postives = 270/357 (75.63%), Query Frame = 0 
Query:    1 AKLALHVWALTAHAQEVLSAQDGFLWTHGTYQFHTLTTEHGEVPPLEGWARMWTDPSNHEVRLVLAEGLELSNLFYFWLSGTLERYLGDSATMEERKIFRENVFGISLSATGLSEVSGKPLSWDVYEAADGRHPIFHTLPGARGTAFFGWQWRAFSEFMDARARVLESDSWEVRGESLLHVQGGEAVHSWAGSLERFLAEFSHGRGLGILHPNLNGAVSFARQVPSGPGWEEEE------------ELLSQTQTEGASTPTPTLRGTEEGE--RDPETLIRSYKDANNLVGKYPAVSSVPAYDLLFRRYPDLTHLRLLAYRFFQRLGESATRNKELENLWRRPGIPKPIYRDAKYLV 343
            A+LALHVWALTAHA+EV+ AQDGF+WTHGTYQFHTLTT+HGEVPPLEGWARMWTDP + EVRLVL EGLELSNLFYFWL+ TL RYLG   TMEER+IFRENVFG+SLSATGLSEVSG P SW  YEAAD + P+FHTLPGARGTAFFGW+                       GE+L+HV GGE   SWAGSLERFLAEF HGRGLGILHPNLNG VSFARQ+P                     E L  +QT  A TPTPTLRGT++G   R+PE L+ +Y+DANNL+ KYP+VSSVPAYDLL RR+ D+THLRL AYRFFQRL  S  RNK+LE+LW+RPG+PKP Y  AK+L+
Sbjct:  139 AELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSNLFYFWLASTLARYLGAGVTMEEREIFRENVFGLSLSATGLSEVSGVPSSWGAYEAADKKRPVFHTLPGARGTAFFGWK----------------------EGEALVHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXEALPLSQT--AHTPTPTLRGTDDGGGGREPEGLVLTYRDANNLIVKYPSVSSVPAYDLLSRRHRDVTHLRLQAYRFFQRLRTSVERNKDLEDLWKRPGMPKPNYALAKFLI 471
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BLAST of mRNA_S-firma_M_contig9275.20222.1 vs. uniprot
Match: D8LE24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE24_ECTSI)

HSP 1 Score: 394 bits (1013), Expect = 4.130e-127
Identity = 215/343 (62.68%), Postives = 235/343 (68.51%), Query Frame = 0 
Query:    1 AKLALHVWALTAHAQEVLSAQDGFLWTHGTYQFHTLTTEHGEVPPLEGWARMWTDPSNHEVRLVLAEGLELSNLFYFWLSGTLERYLGDSATMEERKIFRENVFGISLSATGLSEVSGKPLSWDVYEAADGRHPIFHTLPGARGTAFFGWQ------------------------------------WRAFSEFMDARARVLESDSWEVRGESLLHVQGGEAVHSWAGSLERFLAEFSHGRGLGILHPNLNGAVSFARQVPSGPGWEEEEE---------------LLSQTQTEGASTPTPTLRGTEE---GERDPETLIRSYKDANNLVGK---YPAVSSVP 286
            A+LALHVWALTAHA+EV+ AQDGF+WTHGTYQFHTLTT+HGEVPPLEGWARMWTDP + EVRLVL EGLELS+LFYFWLS TL RYLG   TMEER+IFR+NVFG+SLSATGLSEVSGKP SW  YEAAD + P+FHTLPGARGTAFFGW+                                    W  FS FMDARARVLESDSWE  GE+L HV GGE   SWAGSLERFLAEF HGRGLGILHPNLNG VSFARQ+P                         LLSQT    A TPTPTLRGT +   G R+PE L+ +Y+DANNLV      PA   VP
Sbjct:   91 AELALHVWALTAHAREVMPAQDGFVWTHGTYQFHTLTTKHGEVPPLEGWARMWTDPIDTEVRLVLPEGLELSSLFYFWLSSTLARYLGAEVTMEEREIFRDNVFGLSLSATGLSEVSGKPSSWGAYEAADKKRPVFHTLPGARGTAFFGWKFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXWGDFSAFMDARARVLESDSWEG-GEALAHVPGGEVALSWAGSLERFLAEFCHGRGLGILHPNLNGDVSFARQLPPXXXXXXXXXXXXXXXXXXXXXXTPLLSQT----AHTPTPTLRGTADDGGGGREPEGLVLTYRDANNLVTSGLDAPAAPGVP 428
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9275.20222.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L5Y8_9PHAE2.000e-15366.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LE24_ECTSI4.130e-12762.68Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33604FAMILY NOT NAMEDcoord: 16..311
NoneNo IPR availablePANTHERPTHR33604:SF1GLYCOSYLTRANSFERASE FAMILY PROTEIN 2coord: 16..311
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..343
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.462

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9275contigS-firma_M_contig9275:768..3851 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9275.20222.1mRNA_S-firma_M_contig9275.20222.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9275 768..3851 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9275.20222.1 ID=prot_S-firma_M_contig9275.20222.1|Name=mRNA_S-firma_M_contig9275.20222.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=343bp
AKLALHVWALTAHAQEVLSAQDGFLWTHGTYQFHTLTTEHGEVPPLEGWA
RMWTDPSNHEVRLVLAEGLELSNLFYFWLSGTLERYLGDSATMEERKIFR
ENVFGISLSATGLSEVSGKPLSWDVYEAADGRHPIFHTLPGARGTAFFGW
QWRAFSEFMDARARVLESDSWEVRGESLLHVQGGEAVHSWAGSLERFLAE
FSHGRGLGILHPNLNGAVSFARQVPSGPGWEEEEELLSQTQTEGASTPTP
TLRGTEEGERDPETLIRSYKDANNLVGKYPAVSSVPAYDLLFRRYPDLTH
LRLLAYRFFQRLGESATRNKELENLWRRPGIPKPIYRDAKYLV
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