prot_S-firma_M_contig926.20205.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig926.20205.1
Unique Nameprot_S-firma_M_contig926.20205.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length172
Homology
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: D8LM03_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM03_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 2.390e-97
Identity = 144/172 (83.72%), Postives = 160/172 (93.02%), Query Frame = 0
Query:    1 MDQPSWMQNTGQATAPGG-AAGGAGPQQSAASQSGDATIIRSVFHFVNIGVSIMMAASAAFGLIDFANFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLTISTWTGFVTLGWGVLTVIAYMSRPEWFEVPKPAQNVAV 171
            MDQPSWMQNTGQA AP G ++GGA  QQ+A S+SGDAT++RSVFHFVNIGV++MMAASAAFGLIDF NFENVVLSVYLMIFA+LLFMYE VRVM +CERPKQ+MTKNFGFFFGAKGRGLYL+FVGFLNFPLDLT+S WTG VTLGWGVLTV+AYM+RPEWFEVPKPAQN +V
Sbjct:    1 MDQPSWMQNTGQAAAPPGTSSGGAPAQQNAGSRSGDATVVRSVFHFVNIGVAVMMAASAAFGLIDFRNFENVVLSVYLMIFAVLLFMYEFVRVMGNCERPKQIMTKNFGFFFGAKGRGLYLVFVGFLNFPLDLTLSFWTGVVTLGWGVLTVLAYMTRPEWFEVPKPAQNTSV 172          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: A0A836CK83_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK83_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.690e-36
Identity = 81/168 (48.21%), Postives = 106/168 (63.10%), Query Frame = 0
Query:    1 MDQPSWMQNTGQATAPGGAAGGAGPQQSAASQSGDAT--IIRSVFHFVNIGVSIMMAASAAFGLIDFANFENV--VLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLTISTWTGFVTLGWGVLTVIAYMSRPEWFEVPK 164
            MDQPSWMQ+     AP  A   A  + +AA  SG +T  I+R+ FHFVNIG+ ++MA SA  G+I+  N + V   L VYL  FA+LLF YE++R + +     ++M +NFG+F+G  GRG YLIFVGFLNF L  T+   TG V LGWG L +     +PEWF V K
Sbjct:    1 MDQPSWMQDGATGGAP-AAPAAASTRPAAAVDSGGSTGAIVRNGFHFVNIGLCVLMAFSAVLGVIEITNAQVVDFFLGVYLFFFAVLLFSYEVLRWVPNANLD-EMMRRNFGWFYGNMGRGFYLIFVGFLNFGLHGTVPLATGIVCLGWGALCIAVGFYKPEWFAVEK 166          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: A0A7S2UC71_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UC71_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 1.590e-10
Identity = 43/131 (32.82%), Postives = 71/131 (54.20%), Query Frame = 0
Query:   38 IIRSVFHFVNIGVSIMMAASAAFGLIDF-----ANFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPL-----DLTISTWTGFVTLGWGVLTVIAYMSRPE 158
            +I  +   +NIG+S MM A    G++DF      ++ +  ++ Y+++FA+LLF YE +    +     Q + KNFGF +G KG+GLYLIF+ FL   L     ++ +   TG   +  G L +    ++PE
Sbjct:   32 LILVLMSMLNIGLSAMMVALGVLGILDFDGKGVEDYSDAFIAGYMIVFAVLLFAYECMW-WKAIGPINQSLRKNFGFMYGLKGKGLYLIFISFLTIGLSDESENVELQWATGISYMAAGFLHLFVVFAKPE 161          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: B5YNL0_THAPS (Predicted protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNL0_THAPS)

HSP 1 Score: 67.0 bits (162), Expect = 1.670e-10
Identity = 47/131 (35.88%), Postives = 73/131 (55.73%), Query Frame = 0
Query:   34 GDATIIRSVFHFVNIGVSIMMAASAAFGLIDF-ANFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLTIST----W-TGFVTLGWGVLTVIAYMSRPE 158
            G A  I+ +F   +I +S +M     FG+ID   +   + +SVY+++FA LLF++EL+    S +   + +  NFGF +G KG+  YLIFV FL   L   +S     W TG   LG G+L +  + ++PE
Sbjct:   53 GKANCIQRLFSLWDICLSALMCCLGVFGIIDNPTSLPEIFVSVYMILFATLLFLFELMW-WKSIDSVNKNLRMNFGFLYGIKGKAAYLIFVAFLAIGLRDDVSVKFLRWMTGGCFLGTGILLLFLHFTKPE 182          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: A0A7S1GLT3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GLT3_CYCTE)

HSP 1 Score: 63.2 bits (152), Expect = 3.720e-9
Identity = 44/126 (34.92%), Postives = 70/126 (55.56%), Query Frame = 0
Query:   46 VNIGVSIMMAASAAFGLIDFANF-----ENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFL-----NFPLDLTISTWTGFVTLGWGVLTVIAYMSRPEWFE 161
            ++IG+S++MA+     ++ F  F         L+ Y++IFA+LLF YE++   S+     + + KNFGF +G +G+GLYLIFV FL     + P    ++  TG   L  GVL ++    +PE  E
Sbjct:   54 IDIGLSLLMASLGVLTILSFKTFAARDISEGFLAGYMIIFALLLFAYEIMW-WSAIPSINKSLRKNFGFLYGLRGKGLYLIFVAFLCLGLGSDPAVTAVTYATGIAFLTVGVLHLLVAFCQPEVSE 178          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: F0Y823_AURAN (Nodulin-like domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y823_AURAN)

HSP 1 Score: 64.7 bits (156), Expect = 5.360e-9
Identity = 40/118 (33.90%), Postives = 70/118 (59.32%), Query Frame = 0
Query:   46 VNIGVSIMMAAS-----AAFGLIDFANFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDL-TISTWTGFVTLGWGVLTVIAYMSRP 157
            VN+G+S+MMAA+     A+ G ++       V+S+YL++F+ + F +E  +V   C+     + +NFGF + A G+ L++IF GFLNF +   T+   TG +    GV+ ++ Y++ P
Sbjct:  284 VNVGLSVMMAATGASSLASSGAVNGNQLSQDVVSLYLLLFSAMWFTFEASQVYP-CDAVVAQLKRNFGFLYNAIGKALFVIFCGFLNFGVQAHTLGLVTGILCCCEGVVLIVLYLNAP 400          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.700e-8
Identity = 35/113 (30.97%), Postives = 58/113 (51.33%), Query Frame = 0
Query:   46 VNIGVSIMMAASAAFGLIDFANFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLTISTWTGFVTLGWGVLTVIAYMSRPE 158
            +N+G+ ++++A+A   LI   NF+ +VL+VYL  FA +L  +E     +       +   NFGF + AKGR L+L+FVG L F     +   +G   +   +      +  PE
Sbjct:    8 INMGLCVLLSATAVLELIGLPNFQTLVLAVYLFAFACILCCFE-----THISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPE 115          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: B7G112_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G112_PHATC)

HSP 1 Score: 61.2 bits (147), Expect = 2.170e-8
Identity = 45/137 (32.85%), Postives = 70/137 (51.09%), Query Frame = 0
Query:   41 SVFHFVNIGVSIMMAASAAFGLIDF-----ANFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPL-DLTIS-----TW-TGFVTLGWGVLTVIAYMSRPEWFEVPKP 165
            S+  F+N G++ MM       LI F     +++    LS Y++IFA++LF+YEL+   +      ++   NFGF +G +G+GL+L+F+ FL   L D   S      W TG   LG G   +  +M+  E     KP
Sbjct:   51 SLLSFLNFGLAAMMGTLGVLSLIHFNPGSSSDYSAAFLSSYMVIFAVILFLYELIW-WTPIAALNKMFRMNFGFMYGLRGKGLFLVFIAFLCLGLRDENASGVKGLDWATGLAWLGAGCFNIFIWMTWSEASAAYKP 186          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: A0A7S2W1J8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1J8_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.560e-8
Identity = 40/99 (40.40%), Postives = 55/99 (55.56%), Query Frame = 0
Query:   67 NFENVVLSVYLMIFAILLFMYELVRVMSSCERPKQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLTISTW----TGFVTLGWGVLTVIAYMSRPEWFE 161
            N   V +  Y+++F++LLF YEL+  +S      +++ KNFGF +G KG+GLYLIFV FL   LD     W    TG   L  G+L +     RPE  E
Sbjct:   83 NASEVFICFYMVMFSLLLFTYELMWWIS-VPTINRIVRKNFGFMYGFKGKGLYLIFVAFLCVGLDNGGEEWLRYFTGVAFLSGGILHLFLVCFRPEIVE 180          
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Match: A0A6S9AF71_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9AF71_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 2.680e-8
Identity = 57/174 (32.76%), Postives = 79/174 (45.40%), Query Frame = 0
Query:    3 QPSWMQNTGQATA----PGGAAGGAGPQQSAASQSGDATIIRSVFHFVNIGVSIMMAASAAFGLI----DFANFENVVLSVYLMIFAILLFMYELVRVMSSCERP--KQVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLT-----ISTWTGFVTLGWGVLTVIAYMSRPEWFE 161
            +P+W    G   A    P  AA  A P    A   G +  ++ +    NI +S +MAA     +I    D ++F    +SVY++IFA+LL  YEL   M     P     + KNFGF +G KG+  YLIFV FL   L        +   TG   L  GV  +    +RP+  E
Sbjct:    5 EPAWASTGGDKAATTSIPSSAAPSAQPNSYQAPGRGCSGCVQRMLSVANISLSALMAALGVLTIIEVGADVSDFARTFVSVYMIIFALLLAFYEL---MWWVPIPFINMNLRKNFGFMYGIKGKAAYLIFVAFLTIGLGSEQRFKWLQWTTGISFLAIGVFHIFLVCTRPDLVE 175          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig926.20205.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
D8LM03_ECTSI2.390e-9783.72Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CK83_9STRA3.690e-3648.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UC71_9STRA1.590e-1032.82Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B5YNL0_THAPS1.670e-1035.88Predicted protein n=1 Tax=Thalassiosira pseudonana... [more]
A0A7S1GLT3_CYCTE3.720e-934.92Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
F0Y823_AURAN5.360e-933.90Nodulin-like domain-containing protein n=1 Tax=Aur... [more]
A0A836CFZ2_9STRA1.700e-830.97Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B7G112_PHATC2.170e-832.85Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S2W1J8_9STRA2.560e-840.40Hypothetical protein (Fragment) n=1 Tax=Eucampia a... [more]
A0A6S9AF71_9STRA2.680e-832.76Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013714Golgi apparatus membrane protein TVP15PFAMPF08507COPI_assoccoord: 42..161
e-value: 1.2E-9
score: 38.3
NoneNo IPR availablePANTHERPTHR38894FAMILY NOT NAMEDcoord: 31..144
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 95..105
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 134..154
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..133
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 155..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 106..128
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..41
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 42..63
NoneNo IPR availableTMHMMTMhelixcoord: 73..95
NoneNo IPR availableTMHMMTMhelixcoord: 41..63
NoneNo IPR availableTMHMMTMhelixcoord: 133..155
NoneNo IPR availableTMHMMTMhelixcoord: 107..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig926contigS-firma_M_contig926:3299..6056 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig926.20205.1mRNA_S-firma_M_contig926.20205.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig926 1457..6103 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig926.20205.1 ID=prot_S-firma_M_contig926.20205.1|Name=mRNA_S-firma_M_contig926.20205.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=172bp
MDQPSWMQNTGQATAPGGAAGGAGPQQSAASQSGDATIIRSVFHFVNIGV
SIMMAASAAFGLIDFANFENVVLSVYLMIFAILLFMYELVRVMSSCERPK
QVMTKNFGFFFGAKGRGLYLIFVGFLNFPLDLTISTWTGFVTLGWGVLTV
IAYMSRPEWFEVPKPAQNVAV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013714Golgi_TVP15