prot_S-firma_M_contig924.20185.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig924.20185.1
Unique Nameprot_S-firma_M_contig924.20185.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length136
Homology
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BLAST of mRNA_S-firma_M_contig924.20185.1 vs. uniprot
Match: A0A836CF13_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF13_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 1.110e-5
Identity = 34/55 (61.82%), Postives = 39/55 (70.91%), Query Frame = 0 
Query:   53 ENLRLQALVSELRAASPSVARLADLAVWKEREAFEEKQNRALALLRKKDAKIREL 107
            EN RL A V+ELR A PSVA+L  L V  ER A E+K  RAL LLR+KDA IR+L
Sbjct:   14 ENERLHATVAELRRAVPSVAKLVALEVGLERTAAEDKGRRALELLRRKDATIRQL 68
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig924.20185.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CF13_9STRA1.110e-561.82Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig924contigS-firma_M_contig924:19005..20606 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig924.20185.1mRNA_S-firma_M_contig924.20185.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig924 19005..20608 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig924.20185.1 ID=prot_S-firma_M_contig924.20185.1|Name=mRNA_S-firma_M_contig924.20185.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=136bp
LASPAGYPSPLGMAQALRRTNVAPPHDAPAAKVMEGSTAAAGGDNPQQLL
KRENLRLQALVSELRAASPSVARLADLAVWKEREAFEEKQNRALALLRKK
DAKIRELGEAVARRRNNVSRQRAAADGKAAAEAAEA
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