prot_S-firma_M_contig9223.20169.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9223.20169.1
Unique Nameprot_S-firma_M_contig9223.20169.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length226
Homology
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BLAST of mRNA_S-firma_M_contig9223.20169.1 vs. uniprot
Match: A0A6H5JBF4_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBF4_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.320e-27
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 0 
Query:    1 MSEILKPRSSSIDLGAVVVVKRDGELHGQRGNVVDRKQGWYRVQLDGSEDIKSFRWAELNDMQASSPARPPVA-PSQSKPQSPSPFKKRKAPSASPVPAAV 100
            M++  K RSSSIDLGA VVVKRDGEL GQRG+VVD+ QGWY+VQL G + IKSFRWAE+ +M+A  P+ PP A PS  KPQ+PSPFKK    S S   AAV
Sbjct:    1 MADKSKARSSSIDLGATVVVKRDGELLGQRGSVVDKNQGWYKVQLPGVDGIKSFRWAEIKEMEAPPPSPPPSAIPSPIKPQAPSPFKKNS--SVSTAAAAV 99
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BLAST of mRNA_S-firma_M_contig9223.20169.1 vs. uniprot
Match: D8LJ46_ECTSI (Similar to deoxynucleotidyltransferase, terminal, interacting protein 2, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ46_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 6.760e-20
Identity = 47/67 (70.15%), Postives = 55/67 (82.09%), Query Frame = 0 
Query:    1 MSEILKPRSSSIDLGAVVVVKRDGELHGQRGNVVDRKQGWYRVQLDGSEDIKSFRWAELNDMQASSP 67
            M +  K RSSSIDLGA VVVKRDGEL GQRG+VVD+KQGWY+VQL G + IKSFRWAE+ +M+A  P
Sbjct:    1 MEDKPKARSSSIDLGATVVVKRDGELLGQRGSVVDKKQGWYKVQLPGVDGIKSFRWAEIKEMEAPPP 67
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9223.20169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JBF4_9PHAE1.320e-2764.36Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LJ46_ECTSI6.760e-2070.15Similar to deoxynucleotidyltransferase, terminal, ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9223contigS-firma_M_contig9223:724..3347 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9223.20169.1mRNA_S-firma_M_contig9223.20169.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9223 671..3347 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9223.20169.1 ID=prot_S-firma_M_contig9223.20169.1|Name=mRNA_S-firma_M_contig9223.20169.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=226bp
MSEILKPRSSSIDLGAVVVVKRDGELHGQRGNVVDRKQGWYRVQLDGSED
IKSFRWAELNDMQASSPARPPVAPSQSKPQSPSPFKKRKAPSASPVPAAV
AAAAAATMSPSARRAAGGLPPRHPSTAGAAAAALAEDSSKKVVTRRRVSP
GHADEKSSPSTAAARRGGRGPPDQKTTAVDADETETDDDNEKGDSGGGGD
GEGTELDEVGGGGADTDTIVEKEQQE
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