prot_S-firma_M_contig922.20167.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig922.20167.1
Unique Nameprot_S-firma_M_contig922.20167.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length740
Homology
BLAST of mRNA_S-firma_M_contig922.20167.1 vs. uniprot
Match: D7FIT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT6_ECTSI)

HSP 1 Score: 207 bits (526), Expect = 6.690e-52
Identity = 270/739 (36.54%), Postives = 322/739 (43.57%), Query Frame = 0
Query:    1 MVLTEEAVWPASVAAWALVGGRLWGSARGTGSALALGDLLSLPVVHHWLVFLAESFRASLVCGAVDAARASTVAMAAPPTPADGSGWTLALLAGVLAGCAGRFLPGDRGLSPLSYGVPWAVQSALYASACYCYCCYSGVAAAHARATVSLFLVSVALVQTTL---GPAFNPLCHLHRAAYLLTGVEKTPPP---------------REVDPEERQLERATPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDARRGSSSRRGRGRGSRGSLAGGLGLGGRTRGXRGAREAPARGLLAEGAARLWGPGGIGALGVGRAFVWTVATAGIIAASRLLPIVGQALSP-------------QHQPQQRPTVADTGPAGIIGGSNNALADTAAIGGHHLGFPTLGGVGDAAGDAAAACPGTAGGVVGAGCTSKMDRPDVVDSGGGEPFGRHP------SIKAGAEDLVGLSPQQLVEQVLAAREAAAHATGRADAAE--RXXXXXXXXXXXXXXPGDAEGGGR-----NSAGSDRWRRGFGGDGXXXXXXXXXXXXXXXXXXXXXXALEELSSRRLLTSAVQDFSSAIGEFSEVSRIWLEEVTGGDVGGDESETIVLQFQAQDSAPSVGPPSRSASHRDSIASGEQLPHESTLQRASSGRDALAEEPERPS-HPSSAAAKPSPLSSGGLPAPNRPPPVG-DSDSLGDNEGDLD-SVAAATAAPPKTA 692
            MVLT   VWPA+VAAW LVGGRLW  A   G A +L DLLSLPV HH LVFL+E+FRASL+CGA+D AR     + AP T                                                           A  HARA VSLF VSVALVQT+    GP FNP   LHR AY + G++K P P               RE D  +    R                     XXXXXXXXXXXXXXXXXXXXX       S D     SSRRGRGRGSRGSLA GLG G   RG + A     RG  A G   +WGPG +GA G GRA VWT A   ++  SRLL +   A+               Q QP ++P  A     G   G+     D+            +GGV    GDA A+    A G    G     +R        G+  GR P       ++AGAEDL  + P QL+EQV+AAR AA  A  RADAAE                 PG A          + +G++  RR  GG+                       A  E  S+ LL +AV+D+SS +GEFSEVS+ WLEEV          + + +  QA + A        +  H    A  +Q  HE    RA  G D L EE  R S  PSS A    P    G  A +   P G   DS G   G L+ +V AATAA   TA
Sbjct:  895 MVLTGFVVWPAAVAAWVLVGGRLW--APRPGRAFSLRDLLSLPVAHHLLVFLSEAFRASLLCGAIDVAR-DVAPLVAPET-----------------------------------------------------------APCHARAMVSLFFVSVALVQTSRRGGGPHFNPYSLLHRVAYAVLGLDKPPAPVPAPLLPALPAAGVPREFDARDIGGGRRGVAQAGGTGTVNGSWNSTAAXXXXXXXXXXXXXXXXXXXXXDESHRLSSND-----SSRRGRGRGSRGSLARGLGSGRPARG-QAATMTTGRGRFARGVVGVWGPGRVGARGAGRALVWTAAAVAVVGMSRLLALSTLAMDRTQLASHDHRQHEHQEQPWRQPPTAGMPIEGGGEGTPEKFPDS-----------VVGGVDGVVGDAPASAGAGAAGARKGGIRGWYERFRGGARDSGDTSGRPPLPPVRAEVEAGAEDLASMDPAQLIEQVMAARTAAVEAADRADAAELAAAQLAIASEERTGASPGAAXXXXXXXXXMDGSGAELARRSEGGEEESEREREGLRAEPVDRTTAATAAAAEEQSKALLGAAVEDYSSVVGEFSEVSKAWLEEVAVASPTEGTGDDVKVNRQAGEDAAFQ----EAKRHTPIKALHKQPLHEPPPDRALDG-DNLGEEAGRLSPSPSSTATDERPPGLAGSSALDHASPEGIGEDSYGSAAGALEPAVPAATAAAAGTA 1549          
BLAST of mRNA_S-firma_M_contig922.20167.1 vs. uniprot
Match: A0A6H5JCS4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCS4_9PHAE)

HSP 1 Score: 199 bits (507), Expect = 1.720e-49
Identity = 267/733 (36.43%), Postives = 320/733 (43.66%), Query Frame = 0
Query:    1 MVLTEEAVWPASVAAWALVGGRLWGSARGTGSALALGDLLSLPVVHHWLVFLAESFRASLVCGAVDAARASTVA-MAAPPTPADGSGWTLALLAGVLAGCAGRFLPGDRGLSPLSYGVPWAVQSALYASACYCYCCYSGVAAAHARATVSLFLVSVALVQTTL---GPAFNPLCHLHRAAYLLTGVEKTPP---PREVDPEE-----RQLERATPPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVDARRGSS---SRRGRGRGSRGSLAGGLGLGGRTRGXRGAREAPARGLLAEGAARLWGPGGIGALGVGRAFVWTVATAGIIAASRLLPIVGQALSP-------------QHQPQQRPTVADTGPAGIIGGSNNALADTAAIGGHHLGFPTLGGVGDAAGDAAAACPGTAGGVVGAGCTSKMDRPDVVDSGGGEPFGRHPS------IKAGAEDLVGLSPQQLVEQVLAAREAAAHATGRADAAE--RXXXXXXXXXXXXXXPGDAEGGGRNSAGSDRWRRGFGGDGXXXXXXXXXXXXXXXXXXXXXXALEELS--SRRLLTSAVQDFSSAIGEFSEVSRIWLEEVTGGDVGGDESETIVLQFQAQDSAPSVGPPSRSASHRDSIASGEQLPHESTLQRASSGRDALAEEPERPS-HPSSAAAKPSPLSSGGLPAPNRPPPVGDS-DSLGDNEGDLD-SVAAATAAPPKTA 692
            MVLTE  VWPA+VAAW LVGGR        G A +L DLLSLPVVHH LVFL+E+FRASL+CGA+D AR  TVA + AP T                                                           A  HARA VSLF VSVALVQT+    GP FNP   LHR AY + G++K PP   PRE D  +     R +E+A                                                S D+ R SS   SRRGR RGSRGSLA GLG G   RG R A     RG  A G   +WGPG +GA GVGR  VWT A   ++  SRLL +   A+               Q QP ++P+ A     G  GG+     D+            +GGV  A GDA A     A      G     +R      G G+  GR PS      ++AGAEDL  + P QL+EQV+AAR+AA  A  RADAAE                 PG A                     XXXXXXXXXXXXXXXXXXX        +  S+ LL +AV+D+SS +GEFSEVS+ WLEE+   +      + + +  QA +  P          H    A   Q PHE    R     D L +E  R S  PSS A    P    G  A +   P G   D+ G   G L+ +V AATAA   TA
Sbjct:  481 MVLTEFVVWPAAVAAWMLVGGR-------PGRAFSLRDLLSLPVVHHLLVFLSEAFRASLLCGAIDVAR--TVAPLVAPET-----------------------------------------------------------APCHARAMVSLFFVSVALVQTSRRGGGPHFNPYSLLHRVAYAVLGLDKPPPAGLPREFDARDIGGGRRVVEQA----------------GGTGTADGSWNATAAAAGAWFAAGSGMSASRRSDDSHRLSSNVPSRRGRDRGSRGSLARGLGSGRPARG-RSATVTTGRGCFARGVVGVWGPGRVGARGVGRTLVWTAAAVAVVVMSRLLALSTLAMDRTQSASHDHRQHEHQEQPWRQPSTAGMPFEGGGGGTPEKFPDS-----------VVGGVDGAVGDAPAGAGAGAAEARKGGIRGWYERFRSGAKGSGDTSGRPPSPPVRAEVEAGAEDLADMDPAQLIEQVMAARKAAVEAADRADAAELAAAQLAIASEERTGTSPGAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNSAXXXATAKQSKALLGAAVEDYSSVVGEFSEVSKAWLEEMAVANPTEGTGDDVKVNRQAGEDVPFQ---EAKHPHAPIQALHRQPPHEPPPDRTPLDGDNLGKEATRISPSPSSTATYERPPGLAGSSALDDTSPDGTGEDASGSEAGALEPAVPAATAAAAGTA 1114          
BLAST of mRNA_S-firma_M_contig922.20167.1 vs. uniprot
Match: A0A835Z4Q5_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q5_9STRA)

HSP 1 Score: 92.0 bits (227), Expect = 3.400e-17
Identity = 66/164 (40.24%), Postives = 83/164 (50.61%), Query Frame = 0
Query:   35 ALGDLLSLPVVHHWLVFLAESFRASLVCGAVDAA----RASTVAMAAPPTPADGSGWTLALLAGVLAGCAGRFLPGDRGLSPLSYGVPWAVQSALYASACYC---------------YCCYSGVAAAHARATVSLFLVSVALVQTTLGPAFNPLCHLHRAAYLL 179
            A+  LL++PVVH   V L ES RA+++C  V AA    RA+  A  AP  P  G      ++AG ++ C G F P DRGL  L  GVPW +QSALYA+  Y                Y   + V AA ARA V+        +QT  GP+FN L  LH A Y L
Sbjct:   80 AIPALLAMPVVHQLAVVLMESHRAAVLCAVVTAAAGSLRAAGSAPNAPALPFFGP-----IIAGAVSACGGLFFPPDRGLRSLREGVPWPLQSALYAATFYHLAVHEQGPLGRFLRHYVLGAAVDAAAARAAVAALFSICGALQTAFGPSFNALAPLHAAVYAL 238          
BLAST of mRNA_S-firma_M_contig922.20167.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.620e-16
Identity = 64/160 (40.00%), Postives = 81/160 (50.62%), Query Frame = 0
Query:   36 LGDLLSLPVVHHWLVFLAESFRASLVCGAVDAARASTVAMAAPPTPADGSGWTLALLAGVLAGCAGRFLPGDRGLSPLSYGVPWAVQSALYASACY-----------CYCCYSG-VAAAHARATVSLFLVSVALVQTTLGPAFNPLCHLHRAAYLLTGVE 183
            +G LL  PV+   L F+AE FRA+  C  V  A     A    P P  G      +L G +AGCAG FLP D+GL+ +  G PW +QSA Y S  +               Y+G   A  ARA V  F  +VA +QT  GP FNP   LHR AY ++GV+
Sbjct:   99 VGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKYYPIPFWGP-----VLLGTIAGCAGMFLPFDKGLASIKGGSPWPLQSAFYGSLAFHLLAHDPHVRAALAPYAGDYTADAARACVVAFFAAVATLQTYAGPHFNPFSPLHRVAYAISGVK 253          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig922.20167.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FIT6_ECTSI6.690e-5236.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCS4_9PHAE1.720e-4936.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q5_9STRA3.400e-1740.24Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A835Z0I7_9STRA1.620e-1640.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 719..739
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 697..718
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..696

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig922contigS-firma_M_contig922:22148..26444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig922.20167.1mRNA_S-firma_M_contig922.20167.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig922 16379..26555 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig922.20167.1 ID=prot_S-firma_M_contig922.20167.1|Name=mRNA_S-firma_M_contig922.20167.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=740bp
MVLTEEAVWPASVAAWALVGGRLWGSARGTGSALALGDLLSLPVVHHWLV
FLAESFRASLVCGAVDAARASTVAMAAPPTPADGSGWTLALLAGVLAGCA
GRFLPGDRGLSPLSYGVPWAVQSALYASACYCYCCYSGVAAAHARATVSL
FLVSVALVQTTLGPAFNPLCHLHRAAYLLTGVEKTPPPREVDPEERQLER
ATPPTVRRRSGGSGTAAAAAVAAGGGGGGGGGVGLVQRSRRRSSNSGSSS
VDARRGSSSRRGRGRGSRGSLAGGLGLGGRTRGGRGAREAPARGLLAEGA
ARLWGPGGIGALGVGRAFVWTVATAGIIAASRLLPIVGQALSPQHQPQQR
PTVADTGPAGIIGGSNNALADTAAIGGHHLGFPTLGGVGDAAGDAAAACP
GTAGGVVGAGCTSKMDRPDVVDSGGGEPFGRHPSIKAGAEDLVGLSPQQL
VEQVLAAREAAAHATGRADAAERAARGALGFRGGQGGPGDAEGGGRNSAG
SDRWRRGFGGDGGGGSSGGDEQARGEEGAPPDDGALEELSSRRLLTSAVQ
DFSSAIGEFSEVSRIWLEEVTGGDVGGDESETIVLQFQAQDSAPSVGPPS
RSASHRDSIASGEQLPHESTLQRASSGRDALAEEPERPSHPSSAAAKPSP
LSSGGLPAPNRPPPVGDSDSLGDNEGDLDSVAAATAAPPKTASPPAAWLR
CFPLAAGFSNAASVVVMLQSQHRLSHRQQRMPLCLTRTV*
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