prot_S-firma_M_contig921.20159.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig921.20159.1
Unique Name	prot_S-firma_M_contig921.20159.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	176

Homology

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BLAST of mRNA_S-firma_M_contig921.20159.1 vs. uniprot
Match: D7G9E7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G9E7_ECTSI)

HSP 1 Score: 283 bits (725), Expect = 1.040e-95
Identity = 148/174 (85.06%), Postives = 161/174 (92.53%), Query Frame = 0

Query:    1 MAGMVGTAAHLPSVTAVSVDILFLVVMVCLLVEVVAGFVMWKTSRVTRSEAAMVSQRQTLRAGVAKTNYTSTFVENSKLKRLLLKVDKDLERVQSAKDRRNKSATKAVRAVRVCVYGAMVVLMWGQPLISFSPDYLWPSCFSHALSGGRTAGSVGALSIVAMFVFGLVPRFSPT 174
            MAGMVG + HLPSV AVSVD LFLVVM+C LVEVVAGFVMWKTSRVTR+EAA++SQRQTLR GVAKTNYT+TFVENSKLKRLLLK +KDLER+QSA+DRR KS  KAVRAVRVCVYG+MVVLMWG+PLISFSPDYLWPS FSHALSGGR AGSVGALSIVAMF+FGLVPR SP+
Sbjct:    1 MAGMVGASPHLPSVMAVSVDTLFLVVMMCSLVEVVAGFVMWKTSRVTRTEAALISQRQTLRTGVAKTNYTATFVENSKLKRLLLKAEKDLERIQSARDRRLKSVAKAVRAVRVCVYGSMVVLMWGRPLISFSPDYLWPSSFSHALSGGRAAGSVGALSIVAMFLFGLVPRLSPS 174

[Close]

BLAST of mRNA_S-firma_M_contig921.20159.1 vs. uniprot
Match: A0A835YKR9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKR9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 6.100e-22
Identity = 61/167 (36.53%), Postives = 94/167 (56.29%), Query Frame = 0

Query:    9 AHLPSVTAVSVDILFLVVMVCLLVEVVAGFVMWKTSRVTRSEAAMVSQRQTLRAGVAKTNYTSTFVENSKLKRLLLKVDKDLERVQSAKDRRNKSATKAVRAVRVCVYGAMVVLMWGQPLISFSPDYLWPSCFSHALSGGRTAGS----VGALSIVAMFVFGLVPRF 171
            A LP+V A++   L L ++VC++VE+++G       R T++E         L+  + KTNY   FVENSKL+R L+KV+K+LER++  +  R     +  R +R+  YGA+V   WGQ  I F+P Y+ P     A++GG   G+    V    +V +F +GL  RF
Sbjct:    5 AALPAVLAINPVGLILAILVCVIVELISGIAHAMAGRRTQAEVTYSEDVALLKVEIVKTNYPEKFVENSKLQRQLIKVEKELERLRGERAARRTKVQRWTRWLRLAAYGALVAAHWGQTAIRFTPAYVTPL---GAVAGGPLQGTPQGGVSIAGVVVLFWWGLGGRF 168

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig921.20159.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig921.20159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7G9E7_ECTSI	1.040e-95	85.06	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835YKR9_9STRA	6.100e-22	36.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 79..99
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 110..129
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 42..109
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 169..175
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 130..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..41
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 149..168
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 145..167
None	No IPR available	TMHMM	TMhelix		coord: 108..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig921	contig	S-firma_M_contig921:8397..10189 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig921.20159.1	mRNA_S-firma_M_contig921.20159.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig921 7779..10876 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig921.20159.1 ID=prot_S-firma_M_contig921.20159.1|Name=mRNA_S-firma_M_contig921.20159.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=176bp
MAGMVGTAAHLPSVTAVSVDILFLVVMVCLLVEVVAGFVMWKTSRVTRSE
AAMVSQRQTLRAGVAKTNYTSTFVENSKLKRLLLKVDKDLERVQSAKDRR
NKSATKAVRAVRVCVYGAMVVLMWGQPLISFSPDYLWPSCFSHALSGGRT
AGSVGALSIVAMFVFGLVPRFSPTG*