prot_S-firma_M_contig9192.20141.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig9192.20141.1
Unique Name	prot_S-firma_M_contig9192.20141.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	220

Homology

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BLAST of mRNA_S-firma_M_contig9192.20141.1 vs. uniprot
Match: D7FT24_ECTSI (Similar to ataxia telangiectasia and Rad3 related protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FT24_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 3.310e-79
Identity = 149/194 (76.80%), Postives = 162/194 (83.51%), Query Frame = 0

Query:    1 ALLGFVGRVPRGVLVGASTRVRAYTRALRYLEEQIRAEHAARRSATGGRASTSLVQAFRNDGANGTLPVLNPAELHQLQAIYRTLSDEPDGMVGLDVMRGAAGVAATLKQRTWQHEHAEDWAGALEVYEQALQERELLNLG-----RRSLSSSQTPRRRRPGAPSHARHEHTGPPESRAAADSVEKTQRIVDLA 189
            ALL FVGRVPRGVLVGA+TRVRAYTRALRYLEEQIR EH ARR+ATG +++ SLV AFRNDGANGTLPVLNPAELHQLQAIYRTLSDEPDGMVGLDVMRGAAGVAATLKQR WQHEHAEDWAGALEVYEQALQEREL+  G     R+ ++ SQTPRRRR   P   R+E      SRA A +++ TQ IVDLA
Sbjct:  867 ALLEFVGRVPRGVLVGAATRVRAYTRALRYLEEQIRTEHVARRTATGRQSAASLVGAFRNDGANGTLPVLNPAELHQLQAIYRTLSDEPDGMVGLDVMRGAAGVAATLKQRAWQHEHAEDWAGALEVYEQALQERELVQFGGRALNRKGMARSQTPRRRR-ADPMQDRYEQMAAQTSRARAGTMQTTQPIVDLA 1059

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BLAST of mRNA_S-firma_M_contig9192.20141.1 vs. uniprot
Match: A0A4D9CU95_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU95_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 6.560e-13
Identity = 57/152 (37.50%), Postives = 77/152 (50.66%), Query Frame = 0

Query:    9 VPRGVLVGASTRVRAYTRALRYLEEQIR----AEHAARRSATGGRASTSLVQAFRN------------------DGANGTLPVLNPAELHQLQAIYRTLSDEPDGMVGLDVMRGAAG--VAATLKQRTWQHEHAEDWAGALEVYEQALQERE 136
            +P  VLV AS R+ A++RAL++LE  +R    A+        GG      +++                     DGAN TLPVLN  E+   Q I   L DEPD + GL   R  A      T++QR  ++EHAE+W+ AL+ YEQALQE E
Sbjct: 2443 IPEMVLVKASMRIGAHSRALKHLESHVRKGPRADGGRESGLEGGPPEAFSIESSMGGGGIEMDGTMLCASPTATDGANNTLPVLNSEEIDLFQKILACL-DEPDSLTGLAAARRKARRPTTTTVRQRIREYEHAEEWSNALQGYEQALQELE 2593

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig9192.20141.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig9192.20141.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FT24_ECTSI	3.310e-79	76.80	Similar to ataxia telangiectasia and Rad3 related ...	[more]
A0A4D9CU95_9STRA	6.560e-13	37.50	Uncharacterized protein n=1 Tax=Nannochloropsis sa...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11139:SF69	SERINE/THREONINE-PROTEIN KINASE ATR	coord: 6..146
None	No IPR available	PANTHER	PTHR11139	ATAXIA TELANGIECTASIA MUTATED ATM -RELATED	coord: 6..146

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig9192	contig	S-firma_M_contig9192:1921..4138 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig9192.20141.1	mRNA_S-firma_M_contig9192.20141.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig9192 1920..4138 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig9192.20141.1 ID=prot_S-firma_M_contig9192.20141.1|Name=mRNA_S-firma_M_contig9192.20141.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=220bp
ALLGFVGRVPRGVLVGASTRVRAYTRALRYLEEQIRAEHAARRSATGGRA
STSLVQAFRNDGANGTLPVLNPAELHQLQAIYRTLSDEPDGMVGLDVMRG
AAGVAATLKQRTWQHEHAEDWAGALEVYEQALQERELLNLGRRSLSSSQT
PRRRRPGAPSHARHEHTGPPESRAAADSVEKTQRIVDLAADDDHTGHPES
RATAVQHDGGDNGKGEAGKR