prot_S-firma_M_contig919.20136.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig919.20136.1
Unique Nameprot_S-firma_M_contig919.20136.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length725
Homology
BLAST of mRNA_S-firma_M_contig919.20136.1 vs. uniprot
Match: A0A6H5KRS6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS6_9PHAE)

HSP 1 Score: 509 bits (1311), Expect = 9.270e-170
Identity = 333/633 (52.61%), Postives = 392/633 (61.93%), Query Frame = 0
Query:   97 PTHHLGSYNSSLSSFLDDASCAARRAALPLLVREHRPAELWFKNMVRGGEFSDALLSLEENLDQVREDTRVLHFGLATGGPRPYQDPRSHHWCLLRLRRLLGPAP-----SGGGGAEQGTETGGQEEDAVRTELAELTKDLLGAAAAAAAMPHLIGTDGGDLEEEKAXXXXXXXXEEDGVRPPRDHRAARRALPGVGKACWQRLSELRLSCGIMAGDLEGLAGCLGSLPHLQVLDLRGHSFRPPTTDFMALARALQACASAASPRSTAFKPGRLRTLTLKFFKVEGAAGVTALGEALSAERFPNLRALSIDNCRLTNRQLCALSATLPSMSRALTALSLRGNYALSDKGIKALADALRTGSAAASEEGITEPI-TEPRLTAAPSAKGSEDSPAGASATRISAAATKSPT-QRAPAWSVPSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSETAGETAAGDGDGGARDVAPLRIESLDLSYSCWWSGPGARPRDGREGEGKGG--PFASLLEVLREGHPCLPLRSLLLEGCYFGDTAMGQLVAALESKTGSCRALRVLNVNGNLFSEVGVRLFGHAFLSGELPLHLRMEVGVLCDGKPCHRKLHADMSLEAKDEIIASWVELQNGL 720
            PT HL S+NSS SSFLD+ASC  R  +LPLLVREHRPAE+ FKNMVRGGEFSDAL SLE N+DQVR+   VL FGL  GGPRPYQDPRSHHWC+LRLRRLLGP P       GGG+E       +EE AV TELA+LT +L+G A AA  +P LI      L  E+         EE  VRP      A+  + G+ KA W  L EL LSCGIM GDLE L+ CLGSLP L+VL L GHS+R P T  +A ARAL    SAASP +   +P RLRTL+LK F VEG  GV  LGE LSAERFP L +LSID+CRL ++QLCAL+A LP MSR L  LS R NYALS  G+ ALA+ALR  + A      T    T+P             + AGA+ T   A   + P  +RAPAWSVPS                      XXXXXXXXX      +  A E A+          A L IESLDLSYSCWW+ P    R G E   KGG  PFA LL++L EG  C  LRSL LEGCY GD ++GQLVAAL +++GSCR LR LNVNGNLFS++GV LF  AF +G++P  LRM V  L + +P +R+L +DM+ E   E +  W E QN L
Sbjct:    3 PTQHLSSFNSSFSSFLDEASCITRHNSLPLLVREHRPAEIRFKNMVRGGEFSDALRSLELNIDQVRKSLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPGPLAEVGDAGGGSED------EEEGAVDTELAQLTVELMGPANAATLVPQLIH----GLTGEEEGAGETPSAEE--VRPAAAKLGAK--VRGL-KAYWPCLRELTLSCGIMRGDLEDLSACLGSLPALEVLVLAGHSYRAPQTTLVAFARALHE--SAASPAAP-IRPRRLRTLSLKHFTVEGVEGVATLGEVLSAERFPRLASLSIDSCRLGDKQLCALAAMLPGMSRTLKTLSFRSNYALSSVGVSALAEALRAPATATDGGSATAATPTKPGFFPTTGCLLGRSASAGATTTGAGAPTAEKPLPERAPAWSVPS--------------------SSXXXXXXXXXTNCPRPTAAAAEAASA-------APAHLTIESLDLSYSCWWNRPERAARTGSESSAKGGSGPFAGLLKILGEGVACPSLRSLRLEGCYLGDASVGQLVAALLNESGSCRKLRELNVNGNLFSKIGVGLFADAFFAGKMPPRLRMFVFCL-NAEPSYRELRSDMAPEDMRETVELWSEHQNDL 589          
BLAST of mRNA_S-firma_M_contig919.20136.1 vs. uniprot
Match: D8LI43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI43_ECTSI)

HSP 1 Score: 351 bits (900), Expect = 1.910e-112
Identity = 207/318 (65.09%), Postives = 224/318 (70.44%), Query Frame = 0
Query:    1 MRSLPPNVVEHVLQWLDLASHLRLREASRFDRDETPRRTTTLAARDCEQARRCQEKIFTPDKNTRLSSITLDIAAPNSSRSSFSSGGSSRGSSPAPPTHHLGSYNSSLSSFLDDASCAARRAALPLLVREHRPAELWFKNMVRGGEFSDALLSLEENLDQVREDTRVLHFGLATGGPRPYQDPRSHHWCLLRLRRLLGPAPSGG-GGAEQGTETGGQEEDAVRTELAELTKDLLGAAAAAAAMPHLIGTDGGDLEEEKAXXXXXXXXEEDGVRPPRDHRAARRALPGVGKACWQRLSELRLSCGIMAGDLEGLAGCLG 317
            MRSL PNVVEH+LQWLDLASHLRLREAS FDRDETPRRTTTLAAR  EQARRCQ  IFTPDK TRL SITLD+ AP+S  SS   G          PT HL S+NSS SSFLD+ASCA RR +LPLL+REHRPAE+ FKNMVRG EFS+AL SLE N+DQVRE   VL FGL  GGPRPYQDPRSHHWC+LRLRRLLGPAP    GGA  G+E  G  E AV TELA+LT +L+GAA AA  +PHLI      L  E+         EE   RP     A   A  G  KA W  L EL LSCGIM GDLE LAGCLG
Sbjct:    1 MRSLSPNVVEHILQWLDLASHLRLREASTFDRDETPRRTTTLAARGSEQARRCQLVIFTPDKKTRLHSITLDVTAPSSGSSSSKCG--------MEPTQHLSSFNSSFSSFLDEASCAKRRNSLPLLIREHRPAEIRFKNMVRGREFSEALRSLELNIDQVRESLCVLDFGLTAGGPRPYQDPRSHHWCMLRLRRLLGPAPLAAVGGAGGGSEDEG--EGAVNTELAQLTVELIGAANAAMLVPHLIH----GLTGEEQGAGDTPSAEE--FRPAA---ATLGAQVGGLKAYWPCLRELMLSCGIMRGDLEDLAGCLG 299          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig919.20136.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KRS6_9PHAE9.270e-17052.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LI43_ECTSI1.910e-11265.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00368LRR_RI_2coord: 422..450
e-value: 0.79
score: 17.9
coord: 319..348
e-value: 58.0
score: 4.7
coord: 646..673
e-value: 5.9
score: 11.7
coord: 617..641
e-value: 84.0
score: 3.5
coord: 393..420
e-value: 82.0
score: 3.6
NoneNo IPR availablePANTHERPTHR24113:SF5RAN GTPASE-ACTIVATING PROTEINcoord: 294..452
NoneNo IPR availablePANTHERPTHR24113FAMILY NOT NAMEDcoord: 294..452
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 293..670
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 278..456
e-value: 7.8E-19
score: 69.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 557..682
e-value: 3.1E-7
score: 31.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig919contigS-firma_M_contig919:18273..22148 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig919.20136.1mRNA_S-firma_M_contig919.20136.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig919 17027..22252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig919.20136.1 ID=prot_S-firma_M_contig919.20136.1|Name=mRNA_S-firma_M_contig919.20136.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=725bp
MRSLPPNVVEHVLQWLDLASHLRLREASRFDRDETPRRTTTLAARDCEQA
RRCQEKIFTPDKNTRLSSITLDIAAPNSSRSSFSSGGSSRGSSPAPPTHH
LGSYNSSLSSFLDDASCAARRAALPLLVREHRPAELWFKNMVRGGEFSDA
LLSLEENLDQVREDTRVLHFGLATGGPRPYQDPRSHHWCLLRLRRLLGPA
PSGGGGAEQGTETGGQEEDAVRTELAELTKDLLGAAAAAAAMPHLIGTDG
GDLEEEKAEEEKEEEVEEDGVRPPRDHRAARRALPGVGKACWQRLSELRL
SCGIMAGDLEGLAGCLGSLPHLQVLDLRGHSFRPPTTDFMALARALQACA
SAASPRSTAFKPGRLRTLTLKFFKVEGAAGVTALGEALSAERFPNLRALS
IDNCRLTNRQLCALSATLPSMSRALTALSLRGNYALSDKGIKALADALRT
GSAAASEEGITEPITEPRLTAAPSAKGSEDSPAGASATRISAAATKSPTQ
RAPAWSVPSPPPTTPPPPPPPTRPSSSRSPSCTCRRRQTAADAAAASETA
GETAAGDGDGGARDVAPLRIESLDLSYSCWWSGPGARPRDGREGEGKGGP
FASLLEVLREGHPCLPLRSLLLEGCYFGDTAMGQLVAALESKTGSCRALR
VLNVNGNLFSEVGVRLFGHAFLSGELPLHLRMEVGVLCDGKPCHRKLHAD
MSLEAKDEIIASWVELQNGLFCNA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf