prot_S-firma_M_contig9168.20108.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9168.20108.1
Unique Nameprot_S-firma_M_contig9168.20108.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length101
Homology
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BLAST of mRNA_S-firma_M_contig9168.20108.1 vs. uniprot
Match: D7FI05_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI05_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 5.060e-29
Identity = 67/96 (69.79%), Postives = 76/96 (79.17%), Query Frame = 0 
Query:    7 EVTLCRAPTLACLGRACGKAGSEVSVLWEGFACQAAAAALNVSFACRIGGLEVPAVSLGGSSTSSTGGRSDWDWTWVPGGDRQEAWGPDWVG-EGG 101
            EVTLCRAPTLACL RACGKAGSEV VLWEG  C+AAA+ LNV+F+CRIGGLEVPAVSL G +T+S+ G        + GG  +EAWGPDWVG EGG
Sbjct:  788 EVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAAS-LNVTFSCRIGGLEVPAVSLEGGATASSSGS-------LAGGFEEEAWGPDWVGGEGG 875
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BLAST of mRNA_S-firma_M_contig9168.20108.1 vs. uniprot
Match: A0A6H5LLL6_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLL6_9PHAE)

HSP 1 Score: 115 bits (289), Expect = 5.980e-28
Identity = 64/95 (67.37%), Postives = 73/95 (76.84%), Query Frame = 0 
Query:    4 AGIEVTLCRAPTLACLGRACGKAGSEVSVLWEGFACQAAAAALNVSFACRIGGLEVPAVSLGGSSTSSTGGRSDWDWTWVPGGDRQEAWGPDWVG 98
            A  EVTLCRAPTLACL RACGKAGSEV VLWEG  C+AAA+ LNV+F+CRIGGLEVPAV LGG +T+S+ G      +W  GG  +EAWGP W G
Sbjct:  270 ADTEVTLCRAPTLACLARACGKAGSEVPVLWEGVGCRAAAS-LNVTFSCRIGGLEVPAVGLGGETTTSSSG------SWA-GGFEEEAWGPYWAG 356
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9168.20108.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI05_ECTSI5.060e-2969.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5LLL6_9PHAE5.980e-2867.37RING-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9168contigS-firma_M_contig9168:2278..2580 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9168.20108.1mRNA_S-firma_M_contig9168.20108.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9168 2278..2582 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9168.20108.1 ID=prot_S-firma_M_contig9168.20108.1|Name=mRNA_S-firma_M_contig9168.20108.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=101bp
AAAAGIEVTLCRAPTLACLGRACGKAGSEVSVLWEGFACQAAAAALNVSF
ACRIGGLEVPAVSLGGSSTSSTGGRSDWDWTWVPGGDRQEAWGPDWVGEG
G
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