prot_S-firma_M_contig9160.20102.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9160.20102.1
Unique Nameprot_S-firma_M_contig9160.20102.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length260
Homology
BLAST of mRNA_S-firma_M_contig9160.20102.1 vs. uniprot
Match: D7G1Q6_ECTSI (EF hand family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1Q6_ECTSI)

HSP 1 Score: 359 bits (922), Expect = 9.110e-120
Identity = 181/263 (68.82%), Postives = 198/263 (75.29%), Query Frame = 0
Query:    1 RQSRFTEPGVHPSFFQEVWPDPGPHHASLPTGFSDLEAASLMFLKRRVVERAQEKPLPSVRGLWRLLWPRTYRDAVGKIGPQEFRGGMAEFEVPVTQCEVWAVVTAFDTDSSGQIRLDKLIHFFRAGGFSETRRHTTHKLYRDLDAANTGAVGLDRIRAACDFSSLPAVTNGKARVEEVAEAFLGHLSQGERSDLEINGPAVSAEQFQEAFRDIGTACIPLEACSWEA------DRPREHAKLEGDGVSADKDELFAGVASCL 257
            R SRFTEPGVHPSFFQEVW DPGPHHASLP G SDLEA SLMFLK RV+ERAQEKPLPSVRGLWRLLWPRTY DAVGK+GP EFR GMAEFEVPVT+CEVWAV TAFDTD+ GQI LDKL+HFFRAGG SE RR   HKL+R LD+ANTGAV L  IRAACDFSS PAV  GKA  EE+   FL HL   E+  L  +   V+AE FQ+AFRDIGTAC  L ACSWEA       + R H   + DG + +   LF GV S +
Sbjct:  221 RTSRFTEPGVHPSFFQEVWRDPGPHHASLPRGLSDLEARSLMFLKNRVIERAQEKPLPSVRGLWRLLWPRTYVDAVGKVGPAEFREGMAEFEVPVTKCEVWAVTTAFDTDNRGQICLDKLMHFFRAGGLSEARRKVVHKLFRGLDSANTGAVPLSSIRAACDFSSSPAVIEGKACEEEITTEFLQHLQNNEQEGLGESSSMVTAEHFQDAFRDIGTACTSLAACSWEAASLQEEKKDRGHLDTDADGNAGEA--LFMGVVSSV 481          
BLAST of mRNA_S-firma_M_contig9160.20102.1 vs. uniprot
Match: A0A6H5L3H9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3H9_9PHAE)

HSP 1 Score: 256 bits (654), Expect = 1.020e-79
Identity = 133/197 (67.51%), Postives = 142/197 (72.08%), Query Frame = 0
Query:    1 RQSRFTEPGVHPSFFQEVWPDPGPHHASLPTGFSDLEAASLMFLKRRVVERAQEKPLPSVRGLWRLLWPRTYRDAVGKIGPQEFRGGMAEFEVPVTQCEVWAVVTAFDTDSSGQ-------------------------IRLDKLIHFFRAGGFSETRRHTTHKLYRDLDAANTGAVGLDRIRAACDFSSLPAVTNG 172
            R SRFTEPGVHPSF QEVWPD GPHHASLP G SDLEA SLMFLK+RV+ERAQEKPLPS+RG    LWPRTY DAVGKIGP EFR GMAEFEVPVT+CEVW V TAFDT++ GQ                         I LDKLIHFFRAGG SE RR   H+L+R LD+ANTGAV L  IRA CDFSS PAV  G
Sbjct:  261 RTSRFTEPGVHPSFSQEVWPDAGPHHASLPRGLSDLEARSLMFLKKRVIERAQEKPLPSMRG----LWPRTYADAVGKIGPAEFREGMAEFEVPVTKCEVWVVTTAFDTNNRGQEDAQRHGLHRSFKTKATNDFPVILQICLDKLIHFFRAGGLSEARRKVVHELFRGLDSANTGAVPLSSIRAVCDFSSSPAVIRG 453          
BLAST of mRNA_S-firma_M_contig9160.20102.1 vs. uniprot
Match: A0A6G0WBJ6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WBJ6_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 2.010e-6
Identity = 38/140 (27.14%), Postives = 67/140 (47.86%), Query Frame = 0
Query:   78 KIGPQEFRGGMAEFEVPVTQCEVWAVVTAFDTDSSGQIRLDKLIHFFRAGGFSETRRHTTHKLYRDLDAANTGAVGLDRIRAACDFSSLPAVTNGKARVEEVAEAFLGHLSQGERSDLEINGPAVSAEQFQEAFRDIGTA 217
            K+   EFR G+ +F V VT+ E+ +++ AFD D  G I  D+ +   R G  +  R       ++ LD  + G V +D +R   D S  P    G    + + + F   LSQ +  D   +   ++ ++F E +R++  +
Sbjct:   73 KLSRDEFRFGLRDFGVDVTEAELDSLIQAFDCDQDGFISFDEFLVALR-GDINPARLSMIEMAFQKLDRTHDGQVTIDDLRNVYDVSKHPEFIQGIKSKDVILDEF---LSQWDTKD---HDGIITMDEFVEYYRNVSAS 205          
BLAST of mRNA_S-firma_M_contig9160.20102.1 vs. uniprot
Match: UPI000B97E7DC (calcyphosin-like protein n=1 Tax=Nilaparvata lugens TaxID=108931 RepID=UPI000B97E7DC)

HSP 1 Score: 55.1 bits (131), Expect = 1.680e-5
Identity = 34/139 (24.46%), Postives = 68/139 (48.92%), Query Frame = 0
Query:   79 IGPQEFRGGMAEFEVPVTQCEVWAVVTAFDTDSSGQIRLDKLIHFFRAGGFSETRRHTTHKLYRDLDAANTGAVGLDRIRAACDFSSLPAVTNGKARVEEVAEAFLGHLSQGERSDLEINGPAVSAEQFQEAFRDIGTA 217
            I  +EFR GM+E  +P+++ ++ A+ + FD D SGQI +D+ +   R    +  R  +    +  +D    G + ++ +R      S P   +G+   E++   +L +  +G     +I+G  V+ E+F   +  I  +
Sbjct:   63 IDMEEFREGMSETGLPLSEQQLLALFSRFDADQSGQINMDEFLLAIRPP-MNAARVKSVKDAFNKMDRTGDGVITIEDLRNVYSVRSHPKFQSGEETEEQILTKYLENFERGG----DIDG-RVTLEEFMNYYSGISAS 195          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9160.20102.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G1Q6_ECTSI9.110e-12068.82EF hand family protein n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5L3H9_9PHAE1.020e-7967.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6G0WBJ6_9STRA2.010e-627.14Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
UPI000B97E7DC1.680e-524.46calcyphosin-like protein n=1 Tax=Nilaparvata lugen... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.238.10coord: 132..222
e-value: 3.7E-8
score: 35.8
NoneNo IPR availableGENE3D1.10.238.10coord: 71..131
e-value: 1.9E-5
score: 26.6
NoneNo IPR availablePANTHERPTHR34524FAMILY NOT NAMEDcoord: 44..209
IPR011992EF-hand domain pairSUPERFAMILY47473EF-handcoord: 77..187

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9160contigS-firma_M_contig9160:1238..4091 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9160.20102.1mRNA_S-firma_M_contig9160.20102.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9160 1238..4091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9160.20102.1 ID=prot_S-firma_M_contig9160.20102.1|Name=mRNA_S-firma_M_contig9160.20102.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=260bp
RQSRFTEPGVHPSFFQEVWPDPGPHHASLPTGFSDLEAASLMFLKRRVVE
RAQEKPLPSVRGLWRLLWPRTYRDAVGKIGPQEFRGGMAEFEVPVTQCEV
WAVVTAFDTDSSGQIRLDKLIHFFRAGGFSETRRHTTHKLYRDLDAANTG
AVGLDRIRAACDFSSLPAVTNGKARVEEVAEAFLGHLSQGERSDLEINGP
AVSAEQFQEAFRDIGTACIPLEACSWEADRPREHAKLEGDGVSADKDELF
AGVASCLRC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011992EF-hand-dom_pair