prot_S-firma_M_contig916.20099.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig916.20099.1
Unique Name	prot_S-firma_M_contig916.20099.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	291

Homology

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BLAST of mRNA_S-firma_M_contig916.20099.1 vs. uniprot
Match: D7G085_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G085_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 2.730e-140
Identity = 207/288 (71.88%), Postives = 230/288 (79.86%), Query Frame = 0

Query:    1 MMATPEESLPLRVSLDSNGPESHADHRGKMFALGLTAVYLVQVTFACLPPVVHWWHTTYYTTPEAEELRGWTWLGANSLWLGLALFWTLLHLDNGPCVATACLLCSLLWGYLLVVLLSQAGRGQLSFLAIADVVLYVVMLGVCLRTAWVGVAKKSSHKARSDGSATWRRVLRKWALVSASLLLLAAFVACWASSLPLTPPASEKESAPWEWNSAILFVMMLAVLWAAFLTRGGLVDETKRAACAWCALVFSGGFVLCSFSWPALGLSGHSLTTSVILAVETSLLVVAA 288
            MMA PEE+LPLRVS++ +GP +H  H GK  ALG T  YL+     C P VV  WH TYY    AE+ RGWTWLGAN+LWL LAL WTLLHLDNGPCVATACLLCS+LW YL +VLLSQA RGQL  +AIAD ++++ ML VC R AWVGVAKKS  KARSDGS+TWRRVLRKWALVSAS  L AAF+ C +SSLPL PP SE+ESAPWEWNSAILF M LAVLWAAFLTRGGLVDETKRAACAW AL FSG FVLCSFSW ALGL   S+TTSV+LAVET++L  AA
Sbjct:    1 MMAAPEETLPLRVSVNGDGPGNHDGHHGKKLALGATVAYLLVFALICFPAVVPLWHPTYYAELGAEQ-RGWTWLGANALWLALALLWTLLHLDNGPCVATACLLCSVLWFYLSLVLLSQACRGQLPLMAIADALVHLTMLIVCFRAAWVGVAKKS-QKARSDGSSTWRRVLRKWALVSASATLFAAFLGCCSSSLPLIPPVSERESAPWEWNSAILFAMTLAVLWAAFLTRGGLVDETKRAACAWIALSFSGSFVLCSFSWQALGLDARSVTTSVVLAVETAVLAAAA 286

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig916.20099.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig916.20099.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7G085_ECTSI	2.730e-140	71.88	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 214..230
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 154..173
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 91..96
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 270..288
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 133..153
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 174..194
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 265..269
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..90
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 97..121
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 52..70
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 289..290
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 231..241
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 30..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 122..132
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 195..213
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 242..264
None	No IPR available	TMHMM	TMhelix		coord: 242..264
None	No IPR available	TMHMM	TMhelix		coord: 170..192
None	No IPR available	TMHMM	TMhelix		coord: 95..117
None	No IPR available	TMHMM	TMhelix		coord: 31..53
None	No IPR available	TMHMM	TMhelix		coord: 127..149
None	No IPR available	TMHMM	TMhelix		coord: 68..90
None	No IPR available	TMHMM	TMhelix		coord: 207..229

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig916	contig	S-firma_M_contig916:3349..7796 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig916.20099.1	mRNA_S-firma_M_contig916.20099.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig916 1825..8610 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig916.20099.1 ID=prot_S-firma_M_contig916.20099.1|Name=mRNA_S-firma_M_contig916.20099.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=291bp
MMATPEESLPLRVSLDSNGPESHADHRGKMFALGLTAVYLVQVTFACLPP
VVHWWHTTYYTTPEAEELRGWTWLGANSLWLGLALFWTLLHLDNGPCVAT
ACLLCSLLWGYLLVVLLSQAGRGQLSFLAIADVVLYVVMLGVCLRTAWVG
VAKKSSHKARSDGSATWRRVLRKWALVSASLLLLAAFVACWASSLPLTPP
ASEKESAPWEWNSAILFVMMLAVLWAAFLTRGGLVDETKRAACAWCALVF
SGGFVLCSFSWPALGLSGHSLTTSVILAVETSLLVVAASL*