prot_S-firma_M_contig9156.20097.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig9156.20097.1
Unique Name	prot_S-firma_M_contig9156.20097.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	257

Homology

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: D7FVY1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVY1_ECTSI)

HSP 1 Score: 396 bits (1018), Expect = 9.500e-133
Identity = 203/253 (80.24%), Postives = 224/253 (88.54%), Query Frame = 0

Query:    1 QNRKVGQWTATATITRVSPSGGQDVAQCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCAKGYWGEEDSGSPSLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPCKGHTCDEN-SWCSAGEGYGGYECTCKDGFKKDXXXXXXXXXXXXXXXXXXXXXXXXCRCSVEGDAYRCEPRHGYRAYTDGETLPDDYYQNPGGGKRLDKITRCVDKRTPDFSIEGPNPAVYRQ 252
            QNRKVG++TA AT+TRV PSG +D+ QC+ IPY I DTDECRLEEGHPMRH+CHRSTVC+NTVGSYECGCA GYWGEE+SGSPSLDKPIKSEDG CGGENSTE+CCG FG M+ERRAACVEDFKCTNDPCKG+TCD++ S CSAG+GY GYEC CKD     XXXXXXXXXXXXXXXXXXXXX   CRCSVEGDAY+CEPRHGY+AY DGET+P DYY+   GGKRLDKITRCVDKRTPDF+I GPNP+VYRQ
Sbjct:   10 QNRKVGKFTAKATVTRVRPSG-EDLTQCYYIPYEIKDTDECRLEEGHPMRHKCHRSTVCINTVGSYECGCAAGYWGEEESGSPSLDKPIKSEDGACGGENSTESCCGTFGYMKERRAACVEDFKCTNDPCKGNTCDDSTSLCSAGQGYKGYECRCKDXXXXXXXXXXXXXXXXXXXXXXXXXXPYHCRCSVEGDAYKCEPRHGYKAYIDGETVPSDYYETIAGGKRLDKITRCVDKRTPDFTIRGPNPSVYRQ 261

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A7S1ZAU1_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZAU1_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 2.540e-17
Identity = 57/165 (34.55%), Postives = 76/165 (46.06%), Query Frame = 0

Query:   22 GQDVA-QCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCA----------------KGYWGE--EDSGSPSLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPC--KG-----HTCDENSWCSAGEG---YGGYECTCKDG 157
            G+DV  QCF +P++I DTDEC LE+GHPM+H+C   + CVNTVGSYEC C                   YW +      SP    P  + +  C  + ST  CC +     +    C   F+C  DPC  KG     + C +N+ C   +       Y C C  G
Sbjct:  137 GRDVTIQCFHVPFTILDTDECALEKGHPMQHKCQEPSFCVNTVGSYECVCPTDDDDGTGGVEGAAAESDYWVKLLSQKRSPWELSPNSTTETSCPNQPSTHNCCAKNAHTSDG-VTCRAAFRCPVDPCGAKGSAEGLNDCAQNAHCRRTKSPLSLPSYNCQCPSG 300

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: B8BSL1_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSL1_THAPS)

HSP 1 Score: 89.7 bits (221), Expect = 1.160e-16
Identity = 50/132 (37.88%), Postives = 66/132 (50.00%), Query Frame = 0

Query:   22 GQDVA-QCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCAK--------------------GYWGE--EDSGSPSLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPC 130
            G++VA QCF +P++I D +EC +E  HPM HRCH  ++CVNT+GSYEC C                       +W E  ++  SP       S +  CGG  ST ACC   G   E  + C   F+C  DPC
Sbjct:  128 GREVATQCFEVPFTILDVNECTVESTHPMAHRCHPPSICVNTLGSYECMCPSEDDNAISSNAIKSFNFVANTDFWKEMNDEQRSPWELSFGSSTESSCGGLASTFACCEEDGHSAEG-SFCRSSFRCPVDPC 258

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A8J9RZS3_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9RZS3_PHATR)

HSP 1 Score: 87.0 bits (214), Expect = 1.220e-16
Identity = 48/127 (37.80%), Postives = 64/127 (50.39%), Query Frame = 0

Query:   22 GQDVA-QCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCAK------------GYWG-----EEDSGSPSLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPC 130
            G+DVA QCF +P++I DTDEC L  GHPMRH+C     C+NT+GSYEC C               +W      E      S +  I+S    C  + ST  CC   G  ++  ++C   F+C  DPC
Sbjct:   62 GRDVATQCFHVPFTIKDTDECVLRTGHPMRHQCQAPAQCINTIGSYECICPTLDSKMPPIHTNTEFWALINAQERSPWELSFNTSIRSS---CPSKPSTYGCCPPQGDTKDG-SSCRASFRCPTDPC 184

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A7S2R3K2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3K2_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 1.560e-16
Identity = 60/202 (29.70%), Postives = 84/202 (41.58%), Query Frame = 0

Query:    1 QNRKVGQWTATATITR-------------------VSPSGGQDVAQCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCA-------KGYWG-EEDSGSPSLDKPIKSED-------------GECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPCKG--HTCDENSWCSAGEG---YGGYECTCKDG 157
            ++RKVG+     ++TR                   V   G + + QCF +P++I DT+EC L   H MRH+CH    CVNT+GSYEC C         GY    +D+ +   +K + +                 C     T  CC   G   E  A C   F+C  DPC G  + CD  + C   E       + CTC +G
Sbjct:   95 EHRKVGEHVVQCSVTRLAEVVTPEQKSQSNINAIVVDDHGREVITQCFHVPFTILDTNECTLPPSHFMRHKCHEPAQCVNTLGSYECLCPTEDDDNNNGYHPIPKDANAEFFEKVMAARKRSPWELSFHSPAMSSCPSSPFTHGCCDSNGHSVEG-AECRSTFRCPLDPCHGGINDCDSKATCQRAESPLEKPSFTCTCPEG 295

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: B7FQ92_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ92_PHATC)

HSP 1 Score: 87.8 bits (216), Expect = 5.130e-16
Identity = 48/127 (37.80%), Postives = 65/127 (51.18%), Query Frame = 0

Query:   22 GQDVA-QCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGC------------AKGYWG-----EEDSGSPSLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPC 130
            G+DVA QCF +P++I DTDEC L  GHPMRH+C     C+NT+GSYEC C            +  +W      E      S +  I+S    C  + ST  CC   G  ++  ++C   F+C  DPC
Sbjct:  107 GRDVATQCFHVPFTIKDTDECVLRTGHPMRHQCQAPAQCINTIGSYECICPTLDSKMPPIHTSTEFWALINAQERSPWELSFNTSIRSS---CPSKPSTYGCCPPQGDTKDG-SSCRASFRCPTDPC 229

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A1E7FEW0_9STRA (EGF-like domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FEW0_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 5.870e-15
Identity = 49/125 (39.20%), Postives = 60/125 (48.00%), Query Frame = 0

Query:   13 TITRVSPSGGQDVAQCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCAKGYWGEE-DSGSP------SLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPC 130
            T T V   G +  +QCF +P++I DT+EC+L  GH MRH C   ++C NT GSYEC C +       D  SP      SLDK        C    ST  CC       E +  C E F C  DPC
Sbjct:  125 TTTTVDEHGREVTSQCFHVPFTILDTNECKLPLGHSMRHVCPPPSICTNTDGSYECSCPRLLNNNNNDDRSPWEVSFSSLDKTS------CPSSPSTIGCCSSLAHSIEGKR-CREKFHCPVDPC 242

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A7S4MS12_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MS12_9STRA)

HSP 1 Score: 84.3 bits (207), Expect = 8.020e-15
Identity = 49/139 (35.25%), Postives = 59/139 (42.45%), Query Frame = 0

Query:   17 VSPSGGQDVAQCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGCAKGYWG-------------------------EEDSGSPSLDKPIKSEDGECGGENSTEACCGRFGRMQERRAACVEDFKCTNDPC 130
            V   G + V QCF +P+ I DTDEC L  GH MRH+C   +VCVNT+GSYEC C     G                         E   G P       S    C G+ ST   C   G   E  ++C   F+C  DPC
Sbjct:  197 VDEEGRRIVTQCFDVPFVILDTDECTLPVGHHMRHKCADPSVCVNTIGSYECVCPSASSGGGGLLPALEDGKAAAAGENFFARLEESRKGDPWSTSLNSSSASSCPGKASTYGGCDSSGHSPEG-SSCRSSFRCAVDPC 334

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A7S2U9F0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9F0_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 5.960e-12
Identity = 30/54 (55.56%), Postives = 36/54 (66.67%), Query Frame = 0

Query:   17 VSPSGGQDVAQCFSIPYSITDTDECRLEEGHPMRHRCHRSTVCVNTVGSYECGC 70
            V   G + V QCF +P++I DTDEC L  GH +RH+C     CVNTVGSYEC C
Sbjct:  137 VDEHGRRVVEQCFHVPFTILDTDECILPVGHALRHQCQEPATCVNTVGSYECLC 190

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BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Match: A0A7S2S2K8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S2K8_9STRA)

HSP 1 Score: 70.1 bits (170), Expect = 5.190e-10
Identity = 52/173 (30.06%), Postives = 71/173 (41.04%), Query Frame = 0

Query:    4 KVGQWTATATITRVSPSGGQDVAQCFSIPYSITDTDECR------------LEEGHPMRHRCHRSTVCVNTVGSYECGCAKGYWGEEDSGSPSLDK--PIKSEDGECGGENSTEACC-GRFGRMQE--RRAACVEDFKCTNDPCKGHTCDENSWCSAGEGYGGYECTCKDGFK 159
            KVG+W   A +            + +   Y ITD DECR            L       HRCH ST CVNT GSYEC C         S  PS+ +    K     C G +S+  CC G   +  +  +   C E+F+C  D C    CD  + C+       + C C +G++
Sbjct:   89 KVGEWIVKAQVE----------GRLWCFVYDITDVDECRGQGASDGFHQTSLPASPEWFHRCHPSTECVNTYGSYECRC---------SFIPSVGRRSSAKVTKWPCQGLSSSSECCSGERSKKGDSSKSLTCREEFECYVDECGHSDCDRLATCTPLFDADRFTCQCPEGYR 242

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig9156.20097.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7FVY1_ECTSI	9.500e-133	80.24	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A7S1ZAU1_9STRA	2.540e-17	34.55	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
B8BSL1_THAPS	1.160e-16	37.88	Uncharacterized protein n=1 Tax=Thalassiosira pseu...	[more]
A0A8J9RZS3_PHATR	1.220e-16	37.80	Hypothetical protein (Fragment) n=1 Tax=Phaeodacty...	[more]
A0A7S2R3K2_9STRA	1.560e-16	29.70	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
B7FQ92_PHATC	5.130e-16	37.80	Predicted protein n=2 Tax=Phaeodactylum tricornutu...	[more]
A0A1E7FEW0_9STRA	5.870e-15	39.20	EGF-like domain-containing protein n=1 Tax=Fragila...	[more]
A0A7S4MS12_9STRA	8.020e-15	35.25	Hypothetical protein (Fragment) n=2 Tax=Odontella ...	[more]
A0A7S2U9F0_9STRA	5.960e-12	55.56	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
A0A7S2S2K8_9STRA	5.190e-10	30.06	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000742	EGF-like domain	SMART	SM00181	egf_5	coord: 40..97 e-value: 13.0 score: 14.7 coord: 124..167 e-value: 5.0 score: 16.1
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 37..80 score: 9.585
IPR000742	EGF-like domain	PROSITE	PS50026	EGF_3	coord: 126..167 score: 8.787
IPR001881	EGF-like calcium-binding domain	SMART	SM00179	egfca_6	coord: 37..97 e-value: 1.0E-4 score: 31.7
IPR001881	EGF-like calcium-binding domain	PFAM	PF07645	EGF_CA	coord: 37..78 e-value: 9.1E-11 score: 41.8
None	No IPR available	GENE3D	2.10.25.10		coord: 39..84 e-value: 4.4E-10 score: 41.3
None	No IPR available	PANTHER	PTHR24034:SF39	LATENT-TRANSFORMING GROWTH FACTOR BETA-BINDING PROTEIN 1	coord: 22..100
None	No IPR available	PANTHER	PTHR24034	FAMILY NOT NAMED	coord: 22..100
None	No IPR available	SUPERFAMILY	57196	EGF/Laminin	coord: 37..79
IPR018097	EGF-like calcium-binding, conserved site	PROSITE	PS01187	EGF_CA	coord: 37..68
IPR000152	EGF-type aspartate/asparagine hydroxylation site	PROSITE	PS00010	ASX_HYDROXYL	coord: 59..70
IPR013032	EGF-like, conserved site	PROSITE	PS01186	EGF_2	coord: 152..166

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig9156	contig	S-firma_M_contig9156:151..4043 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig9156.20097.1	mRNA_S-firma_M_contig9156.20097.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig9156 151..4043 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig9156.20097.1 ID=prot_S-firma_M_contig9156.20097.1|Name=mRNA_S-firma_M_contig9156.20097.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=257bp
QNRKVGQWTATATITRVSPSGGQDVAQCFSIPYSITDTDECRLEEGHPMR
HRCHRSTVCVNTVGSYECGCAKGYWGEEDSGSPSLDKPIKSEDGECGGEN
STEACCGRFGRMQERRAACVEDFKCTNDPCKGHTCDENSWCSAGEGYGGY
ECTCKDGFKKDDRGDCVRDVRVAVNHCRNNTCPYHCRCSVEGDAYRCEPR
HGYRAYTDGETLPDDYYQNPGGGKRLDKITRCVDKRTPDFSIEGPNPAVY
RQASRV*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013032	EGF-like_CS
IPR000152	EGF-type_Asp/Asn_hydroxyl_site
IPR018097	EGF_Ca-bd_CS
IPR001881	EGF-like_Ca-bd_dom
IPR000742	EGF-like_dom