prot_S-firma_M_contig9153.20094.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9153.20094.1
Unique Nameprot_S-firma_M_contig9153.20094.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length192
Homology
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BLAST of mRNA_S-firma_M_contig9153.20094.1 vs. uniprot
Match: D7FK77_ECTSI (Poly [ADP-ribose] polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK77_ECTSI)

HSP 1 Score: 89.7 bits (221), Expect = 2.050e-17
Identity = 56/84 (66.67%), Postives = 61/84 (72.62%), Query Frame = 0 
Query:  110 AKGKKGAGPVTGKRGLKGQAAPDASGGRVGTVDPAAGLSAAAVLAE-EEADQELDAMLTLVDVKQNTDKYFVLQVISEPASSKK 192
            AKGKK A P TGKRGLK           VG VDPAAGLS  A+LAE E+ D+ELDAMLTL+DVK+N DKYFVLQVI EPA S K
Sbjct:  152 AKGKKTAAPATGKRGLKXXXXXXXXXXXVGKVDPAAGLSDDAILAEAEDEDEELDAMLTLIDVKKNMDKYFVLQVILEPAGSSK 235
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9153.20094.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK77_ECTSI2.050e-1766.67Poly [ADP-ribose] polymerase n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036930WGR domain superfamilyGENE3D2.20.140.10coord: 133..192
e-value: 4.4E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9153contigS-firma_M_contig9153:1584..3437 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9153.20094.1mRNA_S-firma_M_contig9153.20094.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9153 1584..3439 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9153.20094.1 ID=prot_S-firma_M_contig9153.20094.1|Name=mRNA_S-firma_M_contig9153.20094.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=192bp
HPPIPQHTNRASTHHRHSIPTPFAWYEWGIVTPHEESIYETRDIMGSTRA
AAARKPAAAAKKSAAAKKTAPAKKQAAAPKKKAAAVAKKKAASAKKAAAP
KKAPSKKAPAKGKKGAGPVTGKRGLKGQAAPDASGGRVGTVDPAAGLSAA
AVLAEEEADQELDAMLTLVDVKQNTDKYFVLQVISEPASSKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036930WGR_dom_sf