prot_S-firma_M_contig915.20092.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig915.20092.1
Unique Nameprot_S-firma_M_contig915.20092.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length573
Homology
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A6H5K089_9PHAE (S4 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K089_9PHAE)

HSP 1 Score: 632 bits (1630), Expect = 8.050e-221
Identity = 328/430 (76.28%), Postives = 368/430 (85.58%), Query Frame = 0
Query:  165 NAIIATVVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPP---------LVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSN-MAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYRRSSGKVGAVNPWEAEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNILRVSGTRKQREAFEQLQELRQSQADEAAPVGGRGAPRLAGGGRGG-------------RKNPANRSKGAKAAFEAVAKAQIFDQ 571
            NA+++TVVSDEDN APIDW+LSRRLP++SRRFYRKALEAGDVKVDGRKV+R +RVKRGARISVDLG Q                        LVFP+RLPRLRVV+EDDHLF +MKPAGM+CQPCAAAP GTVLHGLMYHMVQSGQ++EG++ MAAAA+ LSQGIVQRLDKQTSGIM+VAKTLAASSKLS LF+KGKV KQYLA+CHGDPGFDSVVDAPLYRRSSGKVGAV PWEAEEF+AKEA+TRVRNVATA  +SLCRADILTGRMHQVRVHLKWIGCPIVGD+EYGDPEAN RV++R+A R ++ RPLLHSVSL+F HPFTN PMSFKAPMP DMWE AQNILR+SGT +Q+EAF +LQELRQSQADEAAPVGGRGAPR+A GGRGG             +K P NRSKGA+AAFEAVAK++IF+Q
Sbjct:  130 NAVVSTVVSDEDNKAPIDWVLSRRLPQHSRRFYRKALEAGDVKVDGRKVKRFIRVKRGARISVDLGRQXXXXXXXXXXXXXXXXXXXXXXXSLVFPQRLPRLRVVFEDDHLFVVMKPAGMICQPCAAAPRGTVLHGLMYHMVQSGQLKEGADTMAAAANTLSQGIVQRLDKQTSGIMVVAKTLAASSKLSALFRKGKVKKQYLAVCHGDPGFDSVVDAPLYRRSSGKVGAVEPWEAEEFRAKEAQTRVRNVATARGLSLCRADILTGRMHQVRVHLKWIGCPIVGDREYGDPEANFRVSKRSAHRAEVQRPLLHSVSLEFIHPFTNKPMSFKAPMPPDMWETAQNILRMSGTPEQQEAFGKLQELRQSQADEAAPVGGRGAPRMAAGGRGGGXXXXXXXXXGGGKKRPGNRSKGARAAFEAVAKSEIFEQ 559          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A835YI41_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI41_9STRA)

HSP 1 Score: 250 bits (639), Expect = 4.880e-73
Identity = 157/379 (41.42%), Postives = 211/379 (55.67%), Query Frame = 0
Query:  172 VSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHG------------DPGFDSV----VDAPLYRRSSGKVGAVNPWE----------AEEFKAKEAKTRVRNVATAAR-------------MSLCRADILTGRMHQVRVHLKWIGCPIVGDKEY---GDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNILRVSGTRK 508
            V  ED NAPIDW+LSR+LP  SRRF+RK L  G+V++DGR  +RLVRV+ G  I+V         A  A A + P    P +  +L VVYED+H+  + KP G+V QP A+ P GT+L+G+++HMV  G+   G  +AA    L QG+V RLD+ TSGI+IVAK L ASS LS +FK  KV+K YLA+  G            D G D      +DAPLY+R+SGK+    P +          A     K A TRV+ +  +A              +   + +I TGR HQ+R HL   G P++GD  Y   GD  A    AR AA+ + + RPLLH++SL   HP TN  +   AP+PADMW V  +++     RK
Sbjct:   10 VEQEDGNAPIDWLLSRKLPHRSRRFFRKQLADGNVQIDGRVNKRLVRVRPGQTITV--------AAAAADAVAPPSEQLPAQDLKLHVVYEDEHIIVVAKPPGIVVQPMASQPRGTLLNGVLHHMVARGECAAGDEVAAQG--LLQGVVHRLDRDTSGIVIVAKNLEASSTLSAMFKSRKVSKTYLAVTAGLPNPARCALEPADSGGDGTGPYTIDAPLYKRASGKMAVATPQQLQXXXXXXXXASAIDVKPALTRVKALPRSAAXXXXXXXXXXXGGLRALQVEITTGRQHQIRAHLLHAGAPVIGDVTYCAGGDAGA----ARAAAAALGVARPLLHALSLTLHHPVTNARLVLVAPLPADMWRVLSDVVGPDAARK 374          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A7S3XRN0_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XRN0_HETAK)

HSP 1 Score: 219 bits (558), Expect = 3.200e-62
Identity = 125/338 (36.98%), Postives = 197/338 (58.28%), Query Frame = 0
Query:  168 IATVVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYRRSSGKVGAVNPWE----AEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNIL 501
            ++  V  E+N AP+DW L+   P+ SRR++RK ++ G+VKV+G+ VRR  +++ G            Q  D  +      +   E L  L V++EDD L A++KPAG+VC P  +  SGTVL+GL++H +++    E    A +   LS+GIV RLDK TSG+MI AK   A+ KLS+ F+  +  K+YL +C+G     +VV+ P+YR  +GK+  ++  +      E + K++K+ V+ +     +SL   +++TGRMHQ R+HLK++G PI+GD  YG      RV + A   + + R LLH+  L   HP T   +   AP+P+DMW V ++ +
Sbjct:   58 VSAEVDSENNGAPLDWYLAHSFPQKSRRYFRKKIQDGEVKVNGKTVRRFAKLRTG------------QVLDLEIEDFAKEIEGAENL-SLSVLFEDDDLVAVLKPAGVVCYPVDSQKSGTVLNGLLHHFLET----EQQVFANSIETLSKGIVHRLDKDTSGVMIFAKNQKAAKKLSQSFESRETVKRYLGVCYGHVEPKTVVEEPVYRTKNGKMAVLSKKQDTSVISESRVKDSKSVVKCLMHRQGLSLVEVELITGRMHQARLHLKYLGAPILGDPIYG----LARVNKDAYQDLGVDRALLHASRLIVQHPRTGEKLDLSAPVPSDMWGVIEDCI 374          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A7S2USK5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2USK5_9STRA)

HSP 1 Score: 200 bits (509), Expect = 1.530e-54
Identity = 137/398 (34.42%), Postives = 208/398 (52.26%), Query Frame = 0
Query:  171 VVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMV------------------QSGQIEEGSNM-------------------------AAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGD--PGFDSVVDAPLYRRSSGKVG----AVNPW------------------EAEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHL-KWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNI 500
            VV  +D++ P+D +L+R+ PE SRRF+RK ++AG VKVD ++V+RL ++++G  +S    P ++            P + PE L  L V++ED+HL A+ KP GM+  P  +  +GTVLHG+++ +                   Q    EE + +                         A   + L+QG+V RLD  TSG+++VAK   A+  ++K F++  V K+Y+A+  GD  PG   +   PL R SSGK+     A   W                  EA+   A+ A T VR +AT  ++S+  A+ILTGRMHQ+RVHL +   CP++GD  YGD + N+R  R  +  + + R LLH+ SL+FTHP T   +S   P+P DM  + Q I
Sbjct:   56 VVGKKDDDWPLDIVLTRQYPEKSRRFFRKIIQAGRVKVDEKEVKRLSKIRKGQLVSAQFKPDEK------------PSMEPEDL-GLEVLFEDEHLIAVAKPPGMIVHPVESCETGTVLHGVLHLLTTPREKVTPKETAAQPEGNQENAQEEDTKVERKPEKNAKKGGPDPWDPAKPLKLTARLCTGLAQGVVHRLDSDTSGVVLVAKNAPAARGMAKQFQQRSVKKKYMAVVVGDLGPGVHHLT-LPLLRTSSGKMAVFQEAQPEWGEEMAGGDMLTGDFTDVGEADAKGARGATTIVRRLATDGQLSVVGAEILTGRMHQLRVHLAQEANCPVLGDPVYGDTDWNRRAKR--SENLQVSRTLLHAHSLEFTHPITGKHVSLSTPVPLDMKRIVQRI 437          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A7S3XXK7_HETAK (Pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXK7_HETAK)

HSP 1 Score: 198 bits (503), Expect = 4.910e-54
Identity = 121/332 (36.45%), Postives = 180/332 (54.22%), Query Frame = 0
Query:  171 VVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYR--RSSGKVGAVNPWEAEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNI 500
            +V +E N   +D  LS   PE SR ++    + G V+V GR V++  +++ G  +SV   P  +  A+            PE +P L ++YED+HL A+ KP GMV  P   + SGT  + L +HM   G   E    A     L  GIV RLDK TSG+++ +K     +KLS++F   K+ K YLA+C G+PG D  ++  + R  ++  K+  ++  +    +A+ A T V  ++  +++SL R  I TGR HQ+RVHL     P++GD+ YG+ + N    RRA  R  L RPLLH+  L+  HP T  P+S KAP+P DM  V   I
Sbjct:   70 IVGEEYNKKRLDAFLSDEFPEQSRSYFGSLCQQGLVRVGGRAVKKSEKLRAGQEVSVAFLPTAEMAAE------------PEDIP-LDILYEDEHLIAVAKPPGMVVHPAPGSWSGTFANALAFHMRSRG---EDYRAAGGGDALRPGIVHRLDKGTSGVLLASKNSQCHAKLSEMFASRKIKKTYLAVCVGNPGQDVKIENLIARHPKNRQKMCVIHETQEGAARARTAVTLVDGLSFDSQLSLARVQIETGRTHQIRVHLAHRRTPVLGDELYGNGDQN----RRAVKRFGLQRPLLHAYQLELDHPITGEPLSLKAPVPEDMVRVLAKI 381          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: D8LFM8_ECTSI (Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFM8_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 1.510e-46
Identity = 116/343 (33.82%), Postives = 185/343 (53.94%), Query Frame = 0
Query:  172 VSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVD--LGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASR----------LSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYR--RSSGKVGAVNPWEAEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNI 500
            V + +    +D  L  R+PE SR ++    + G V V G+  ++ V+V+ G  + V   + P+   Q               E +P L ++YEDD + A+ KPAGMV  P   + +GT ++ L++H+ +SG    G  +A AA +          L  GIV RLDK T+G+++ AK     +KL++LF + +++K YLA+C G+PG  + +D P+ R  R   ++ AV P      +++ A + V  VA   ++S+    I TGR HQ+RVHL+    P++GD+ YG+ + N    RR      L RPLLH+ SL+F HP T   +S  AP+P+D+  V + I
Sbjct:  108 VEEGEGGKRLDSFLGARMPEQSRSYFGGLCQLGMVLVGGKTAKKSVKVEEGQEVEVRFIISPELSLQG--------------EDIP-LDILYEDDEIIAVSKPAGMVVHPAPGSWNGTFVNALVFHLEKSGADGNGLGVAEAAFQSVPDGEHNPSLRPGIVHRLDKGTTGVLLAAKNPTMQAKLAELFAQRRISKSYLAVCVGNPGKAATIDVPIGRHPRDRQRMVAV-PTIQPNIRSRRALSVVTTVAFDGKLSVAEVSIETGRTHQIRVHLQHRRTPVLGDEVYGNNDWN----RRLRQSTGLTRPLLHARSLEFKHPNTGEVVSLAAPLPSDVEAVVRRI 430          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A6M1ZVU5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M1ZVU5_9BACT)

HSP 1 Score: 171 bits (434), Expect = 2.680e-45
Identity = 115/339 (33.92%), Postives = 180/339 (53.10%), Query Frame = 0
Query:  171 VVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVD--LGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYRRSSGKVGAVNPWEAEEF-----KAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNILR 502
            +V++E+    +D +L+ R PE SR ++++ ++   V V+G++V++ + ++    I +   L P+   +              PE +P L ++YED+ L  I KPAG+V  P A   SGT+++GL++H  Q            AA  L  GIV RLDK TSG+++ AK   A  KLS LF   +V K+YLAIC  +PG + ++D P+ R         +P   +E      + +EA+T   ++     +SL R    TGR HQ+RVHLK I  PI+GD  YG+   N++          L   LLH+  L F HP +   + FKAP+P DM ++  +I+R
Sbjct:    7 IVTEEEEKLRLDTLLATRFPELSRTYFQQLIDRQLVLVNGKQVKKRIHLRSADEIEIQFVLSPEISLE--------------PEEIP-LDILYEDEELLVINKPAGLVVHPGAGHSSGTLVNGLLFHCKQ----------LKAAESLRPGIVHRLDKGTSGLLVAAKNEEAQMKLSTLFANRQVHKEYLAICISNPG-NRLIDQPIGR---------HPVRRKEMTILKERGREAQTETHSLVHNGELSLVRLIPKTGRTHQLRVHLKSIRAPILGDPVYGNHYLNKKYG--------LTHQLLHAEILRFVHPISGEKVEFKAPIPEDMQKIIDSIIR 302          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A1F8JQK3_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_49_9 TaxID=1797605 RepID=A0A1F8JQK3_9BACT)

HSP 1 Score: 171 bits (433), Expect = 5.270e-45
Identity = 122/329 (37.08%), Postives = 174/329 (52.89%), Query Frame = 0
Query:  172 VSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYRRSSGKVGAVNPWEAEEFKA----KEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLP-RPLLHSVSLDFTHPFTNTPMSFKAPMPADMWE 495
            V+ E+    ID +L  R P++SR +++  +E+G V ++G  V++ +  + G  I V        QA TA A+ +P     E +P L ++YED+H+ A+ KPAGMV  P     SGT ++ L+ H  +         +A ++  L  GIV RLDK TSG++I AKTL A  KL ++F   ++ K YLAIC+G P  +  ++ P+ R         +P   +E  A    +EA T V+  A   + SL      TGR HQ+RVHLK IGCPIVGD  YG              + D P R LLH+  L F HP T  P+   AP+P DM E
Sbjct:   16 VTAEEEGMRIDTLLGCRFPDHSRTYFQYLIESGFVLLNGEPVKKRILPEEGDEIEVCF------QA-TAEASLEP-----ESIP-LDILYEDEHILAVNKPAGMVVHPAPGHWSGTFVNALLGHCRE---------IAPSSDPLRPGIVHRLDKDTSGVLIAAKTLIAHQKLIEMFSSRRIEKLYLAICYGRPQ-NGTINIPIGR---------HPVHRKEMAALPDGREAITEVQTAAFNEKTSLVLLRPKTGRTHQLRVHLKHIGCPIVGDPVYG-------------KKTDSPKRQLLHAYRLAFEHPITRAPIKLTAPLPQDMKE 299          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A6M2A1C5_9BACT (Pseudouridine synthase n=1 Tax=Chlamydiae bacterium TaxID=2081524 RepID=A0A6M2A1C5_9BACT)

HSP 1 Score: 170 bits (430), Expect = 1.030e-44
Identity = 115/324 (35.49%), Postives = 169/324 (52.16%), Query Frame = 0
Query:  171 VVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYRRS-SGKVGAVNPWEAEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADM 493
            VVS ED    +D  L++  P +SR +++  ++   V ++G  +++  R+  G  + V    Q     D          V PE +P L ++YED+ +  + KP+GMV  P   + SGT  + L++H  Q  + EE  N       L  GIV RLDK TSGI+I AK LAA  KL + F    + KQYL IC G P  +    AP+ R   + K   +NP      + KEA+T    +     +SL +A ++TGR HQ+RVHLK + CP++GD  YG P  NQ+         +  R +LH+ SL   HP +  P+ F AP+P+DM
Sbjct:    6 VVSKEDLGERVDKFLTQYFPNHSRTYFQFLIDEESVLLNGHPIKKQHRLVEGDEVEVSF--QTLPMLD----------VKPEAIP-LEILYEDESIIVVNKPSGMVVHPAPGSYSGTFANALLHHCKQLKK-EEFEN-------LRPGIVHRLDKDTSGILIAAKNLAAHQKLVEQFASRSIEKQYLVICLGVPK-EGECSAPIKRHPINRKQMTINP------EGKEARTHFTVLGRRKGLSLVQAKLITGRTHQIRVHLKSMNCPVLGDTTYGSPSLNQK--------YNTTRQMLHARSLKMIHPISEIPLEFIAPIPSDM 293          
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Match: A0A1F8JRD2_9BACT (Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=204428 RepID=A0A1F8JRD2_9BACT)

HSP 1 Score: 169 bits (427), Expect = 2.920e-44
Identity = 113/324 (34.88%), Postives = 170/324 (52.47%), Query Frame = 0
Query:  171 VVSDEDNNAPIDWILSRRLPENSRRFYRKALEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVFPERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSGQIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKGKVTKQYLAICHGDPGFDSVVDAPLYRRS-SGKVGAVNPWEAEEFKAKEAKTRVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQRVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADM 493
            +++ ED    +D +L+      SR +++  +EAG V ++G  V++  + + G  +S+ L P  + + +       P  +F      L +++ED+HL AI KPAGMV  P    PS T ++ L++H  +              + L  GIV RLDK+TSG+++ AK+ AA  ++  LF + KV K Y+AIC G+P  D  + APL R     K  AV P        KEA T +R +++    S      LTGR HQ+RVH++ IG PI+GD  YG    N++        + L R LLH+ SL F HPF   P+   AP+PA M
Sbjct:    8 LITQEDAGRRLDLLLASHYSSYSRSYFQYLMEAGAVLLNGSPVKKRTKPRLGDEVSLSLIPLPEMRLE-------PEAIF------LDILFEDEHLIAINKPAGMVVHPAPGHPSHTFVNALLHHCKELPD--------TLGAPLRPGIVHRLDKETSGVLLAAKSQAAHREIVSLFSERKVKKTYVAICLGNPK-DQTIRAPLLRHPVRRKEIAVAP------SGKEAVTSIRVLSSQGNYSFVEIAPLTGRTHQIRVHMRHIGAPILGDPVYGPAFLNKK--------LQLSRQLLHARSLFFIHPFEKRPLEISAPLPAAM 295          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig915.20092.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K089_9PHAE8.050e-22176.28S4 domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A835YI41_9STRA4.880e-7341.42Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A7S3XRN0_HETAK3.200e-6236.98Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
A0A7S2USK5_9STRA1.530e-5434.42Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S3XXK7_HETAK4.910e-5436.45Pseudouridine synthase n=1 Tax=Heterosigma akashiw... [more]
D8LFM8_ECTSI1.510e-4633.82Pseudouridine synthase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A6M1ZVU5_9BACT2.680e-4533.92Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A1F8JQK3_9BACT5.270e-4537.08Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A6M2A1C5_9BACT1.030e-4435.49Pseudouridine synthase n=1 Tax=Chlamydiae bacteriu... [more]
A0A1F8JRD2_9BACT2.920e-4434.88Pseudouridine synthase n=2 Tax=Chlamydiae TaxID=20... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.2350.10coord: 258..503
e-value: 1.7E-59
score: 203.1
NoneNo IPR availablePANTHERPTHR21600RIBOSOMAL LARGE SUBUNIT PSEUDOURIDINE SYNTHASE Bcoord: 180..502
NoneNo IPR availablePANTHERPTHR21600:SF34RNA PSEUDOURIDINE SYNTHASE 2, CHLOROPLASTICcoord: 180..502
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..572
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..15
score: 5.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.546
NoneNo IPR availableSUPERFAMILY55174Alpha-L RNA-binding motifcoord: 181..237
IPR036986RNA-binding S4 domain superfamilyGENE3D3.10.290.10coord: 167..234
e-value: 1.6E-7
score: 32.7
IPR006145Pseudouridine synthase, RsuA/RluAPFAMPF00849PseudoU_synth_2coord: 265..431
e-value: 7.5E-26
score: 91.1
IPR006225Pseudouridine synthase, RluC/RluDTIGRFAMTIGR00005TIGR00005coord: 178..499
e-value: 1.0E-64
score: 216.7
IPR006224Pseudouridine synthase, RluC/RluD, conserved sitePROSITEPS01129PSI_RLUcoord: 320..334
IPR002942RNA-binding S4 domainPROSITEPS50889S4coord: 179..264
score: 9.893
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 254..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig915contigS-firma_M_contig915:19937..23230 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig915.20092.1mRNA_S-firma_M_contig915.20092.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig915 19403..23891 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig915.20092.1 ID=prot_S-firma_M_contig915.20092.1|Name=mRNA_S-firma_M_contig915.20092.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=573bp
MTRWMTIGLLGTAGCRTSAFCVATTPRSHQAQPAPVGSSPALRAATLQRR
SSGSVWVARRRRHRGIMCVADGEASTSEATAAGAVGDELASLQHLTQPGE
GGEEEEEGEGERGEGEGFSSSSEEEFATAPPPATAAVAAAAAAESAATER
PPRNGNGNTNTNTNNAIIATVVSDEDNNAPIDWILSRRLPENSRRFYRKA
LEAGDVKVDGRKVRRLVRVKRGARISVDLGPQKQQQADTAVATSQPPLVF
PERLPRLRVVYEDDHLFAIMKPAGMVCQPCAAAPSGTVLHGLMYHMVQSG
QIEEGSNMAAAASRLSQGIVQRLDKQTSGIMIVAKTLAASSKLSKLFKKG
KVTKQYLAICHGDPGFDSVVDAPLYRRSSGKVGAVNPWEAEEFKAKEAKT
RVRNVATAARMSLCRADILTGRMHQVRVHLKWIGCPIVGDKEYGDPEANQ
RVARRAASRVDLPRPLLHSVSLDFTHPFTNTPMSFKAPMPADMWEVAQNI
LRVSGTRKQREAFEQLQELRQSQADEAAPVGGRGAPRLAGGGRGGRKNPA
NRSKGAKAAFEAVAKAQIFDQQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020103PsdUridine_synth_cat_dom_sf
IPR002942S4_RNA-bd
IPR006224PsdUridine_synth_RluC/D_CS
IPR006225PsdUridine_synth_RluC/D
IPR006145PsdUridine_synth_RsuA/RluA
IPR036986S4_RNA-bd_sf