prot_S-firma_M_contig9140.20086.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9140.20086.1
Unique Nameprot_S-firma_M_contig9140.20086.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length107
Homology
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: D8LQB9_ECTSI (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB9_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 2.070e-66
Identity = 106/107 (99.07%), Postives = 107/107 (100.00%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAF+GRLLRHNRHVLWASETSRPDLGGTEGDD
Sbjct:  191 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHVLWASETSRPDLGGTEGDD 297          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: A0A6H5J9K7_9PHAE (DNA polymerase epsilon catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9K7_9PHAE)

HSP 1 Score: 223 bits (567), Expect = 2.620e-65
Identity = 105/107 (98.13%), Postives = 106/107 (99.07%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAF+GRLLRHNRHVLWASETSRPDLGG EGDD
Sbjct:  771 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFFGRLLRHNRHVLWASETSRPDLGGREGDD 877          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: W7TVX1_9STRA (DNA-directed DNA polymerase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVX1_9STRA)

HSP 1 Score: 145 bits (365), Expect = 4.400e-38
Identity = 66/106 (62.26%), Postives = 78/106 (73.58%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGD 106
            LRR +PAL++LPV  +P NA+D RYPAL WQ+++ QRM+QRF   P WL DRL  ARY+HLPL N+G D    MAD   GRLL  NRHVLWASE +RPDLGG E D
Sbjct: 1647 LRRSVPALNDLPVVSMPSNADDNRYPALSWQSYSTQRMIQRFLCMPGWLQDRLQAARYSHLPLGNLGLDPQRTMADVLLGRLLHGNRHVLWASEGTRPDLGGAEDD 1752          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: A0A7S3M6C7_9STRA (DNA polymerase epsilon catalytic subunit (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M6C7_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.950e-30
Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    2 RRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLG 101
            R  LP+L + P+  +P N+ D  +PA+GWQ F A+RMVQRF I PRW  DRL  ARYAH+PL N+G DA   M D  + R L HNRH+LW SE + PDLG
Sbjct:  420 RHVLPSLHDYPLAVMPANSLDSLFPAIGWQLFCAERMVQRFLIFPRWFDDRLTAARYAHIPLCNLGTDALTTMIDVTFSRQLLHNRHLLWCSEGTGPDLG 519          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: B3S6C7_TRIAD (DNA polymerase epsilon catalytic subunit n=2 Tax=Trichoplax TaxID=10227 RepID=B3S6C7_TRIAD)

HSP 1 Score: 110 bits (276), Expect = 4.450e-26
Identity = 50/103 (48.54%), Postives = 64/103 (62.14%), Query Frame = 0
Query:    5 LPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            +PA+++ PV  +  N  D RYP L WQ  A +RM+Q       WL +RL  ARYAH+PL N+ AD P  + D F+ R L  N H++WAS T RPDLGG E DD
Sbjct: 1584 IPAINDFPVASVSSNDSDNRYPILDWQRHAVRRMIQHHLNIEIWLENRLDHARYAHIPLGNMPADVPLFVNDLFFARYLAKNNHLIWASRTPRPDLGGKEDDD 1686          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: A0A1X7V9K2_AMPQE (DNA polymerase epsilon catalytic subunit n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V9K2_AMPQE)

HSP 1 Score: 100 bits (250), Expect = 1.440e-22
Identity = 49/107 (45.79%), Postives = 63/107 (58.88%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            LR  +PAL + P   IP    D  Y  L WQ  A+++M+ +   AP WL +RL  ARYAH+P+ N   DA    AD FY R L  + HV+WA+ T +PDLGG E DD
Sbjct: 1605 LRNAVPALDQFPHVLIPFIESDNHYLLLDWQRSASKKMIAQLLNAPTWLHNRLEYARYAHIPVGNFCPDAVVYAADVFYSRHLARHNHVIWATPTDQPDLGGHESDD 1711          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: UPI001F0411E6 (LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like n=1 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F0411E6)

HSP 1 Score: 100 bits (248), Expect = 2.680e-22
Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            L+  LP L+E PV  IP N  +  +  L WQ   A+R++Q +  +  WL  +L  AR+ H+PL NI ADA     D FY R L  N HVLW S   RPDLGG E D+
Sbjct: 1596 LQSNLPILNEFPVVTIPTNENEAPFNVLDWQRHIAKRIIQHYLYSDTWLQAQLEHARFCHIPLGNITADAAAFACDVFYARNLEKNNHVLWLSPGDRPDLGGKEDDE 1702          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: I0Z2H6_COCSC (DNA polymerase epsilon catalytic subunit n=2 Tax=Coccomyxa TaxID=41891 RepID=I0Z2H6_COCSC)

HSP 1 Score: 98.6 bits (244), Expect = 9.270e-22
Identity = 48/107 (44.86%), Postives = 62/107 (57.94%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            L R +P L+E P   +P ++ D  YP+LGWQ  AA+  V R   A  W  DR+  ARYAHLPL N+G D    +ADA   R LR   H+LW S+ + PD+ G   DD
Sbjct: 1523 LTRDMPLLAEFPTCQVPAHSADGAYPSLGWQPKAARTAVMRLAGAALWFQDRIELARYAHLPLGNLGGDWMLDVADAHLARCLRDAGHLLWISDPALPDVAGRADDD 1629          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: A0A7D9EAA6_PARCT (DNA polymerase epsilon catalytic subunit n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EAA6_PARCT)

HSP 1 Score: 97.8 bits (242), Expect = 1.680e-21
Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 0
Query:    5 LPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLGGTEGDD 107
            +P L++ PV  IP N  D  +  L WQ  AA+R++Q +  +  WL  ++  ARY H+P+ NI ADA    +D F+ R L  + HV+W S   RPDLGG E DD
Sbjct:  306 IPVLNDFPVVSIPNNESDTPFNILDWQRHAARRVIQHYLYSDTWLQAQVEHARYCHIPVGNISADAAAFASDVFFARNLGKSNHVVWLSPGERPDLGGKEEDD 408          
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Match: A0A7S3NK85_9STRA (DNA polymerase epsilon catalytic subunit n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NK85_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 2.360e-21
Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLADRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDLG 101
            LRR +P L + P   +  +  D  +PALGW++  A+R  +R    P WL  R   AR+ ++P+ N+G D    +AD  + RLLR+NRH+LWASE+ +PDLG
Sbjct: 1678 LRRSVPVLGDFPNVEMTFHEADSEFPALGWRSAMAKRSFERLTACPAWLEARFATARFGNVPVGNLGDDPLIRVADTAFARLLRNNRHLLWASESPQPDLG 1778          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9140.20086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQB9_ECTSI2.070e-6699.07DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
A0A6H5J9K7_9PHAE2.620e-6598.13DNA polymerase epsilon catalytic subunit n=1 Tax=E... [more]
W7TVX1_9STRA4.400e-3862.26DNA-directed DNA polymerase n=2 Tax=Monodopsidacea... [more]
A0A7S3M6C7_9STRA1.950e-3055.00DNA polymerase epsilon catalytic subunit (Fragment... [more]
B3S6C7_TRIAD4.450e-2648.54DNA polymerase epsilon catalytic subunit n=2 Tax=T... [more]
A0A1X7V9K2_AMPQE1.440e-2245.79DNA polymerase epsilon catalytic subunit n=1 Tax=A... [more]
UPI001F0411E62.680e-2244.86LOW QUALITY PROTEIN: DNA polymerase epsilon cataly... [more]
I0Z2H6_COCSC9.270e-2244.86DNA polymerase epsilon catalytic subunit n=2 Tax=C... [more]
A0A7D9EAA6_PARCT1.680e-2142.72DNA polymerase epsilon catalytic subunit n=1 Tax=P... [more]
A0A7S3NK85_9STRA2.360e-2142.57DNA polymerase epsilon catalytic subunit n=1 Tax=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013697DNA polymerase epsilon, catalytic subunit A, C-terminalSMARTSM01159DUF1744_2coord: 1..107
e-value: 0.0079
score: -181.3
IPR013697DNA polymerase epsilon, catalytic subunit A, C-terminalPFAMPF08490DUF1744coord: 2..107
e-value: 5.7E-33
score: 114.1
IPR029703DNA polymerase epsilon catalytic subunitPANTHERPTHR10670DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..107
NoneNo IPR availablePANTHERPTHR10670:SF0DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 2..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9140contigS-firma_M_contig9140:123..765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9140.20086.1mRNA_S-firma_M_contig9140.20086.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9140 123..765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9140.20086.1 ID=prot_S-firma_M_contig9140.20086.1|Name=mRNA_S-firma_M_contig9140.20086.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=107bp
LRRRLPALSELPVTHIPGNAEDERYPALGWQAFAAQRMVQRFFIAPRWLA
DRLLCARYAHLPLANIGADAPCAMADAFYGRLLRHNRHVLWASETSRPDL
GGTEGDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029703POL2
IPR013697DNA_pol_e_suA_C