prot_S-firma_M_contig9137.20082.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig9137.20082.1
Unique Name	prot_S-firma_M_contig9137.20082.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	94

Homology

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: D7FN81_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FN81_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 1.410e-43
Identity = 80/94 (85.11%), Postives = 82/94 (87.23%), Query Frame = 0

Query:    1 EKSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            EKSRNKELRDLFQAGVGCHHAGMLR+DRGLTERA    + K VLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQ      RP
Sbjct:  895 EKSRNKELRDLFQAGVGCHHAGMLRADRGLTERAFEDGAIK-VLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQVFGRAGRP 987

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A835Z6M6_9STRA (Sec63 Brl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6M6_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.480e-38
Identity = 71/93 (76.34%), Postives = 77/93 (82.80%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRN+ELR LF +GVGCHHAGMLRSDRGLTERA      + +LVCTATLAWGVNLPAHTVIIKGTEVYNPEKGG +DLS+LDVLQ      RP
Sbjct:  134 KSRNRELRQLFASGVGCHHAGMLRSDRGLTERAFEDGGLR-LLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGAEDLSILDVLQIFGRAGRP 225

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A4Y7JGA1_PAPSO (Uncharacterized protein n=3 Tax=Papaver somniferum TaxID=3469 RepID=A0A4Y7JGA1_PAPSO)

HSP 1 Score: 131 bits (330), Expect = 1.350e-33
Identity = 62/94 (65.96%), Postives = 77/94 (81.91%), Query Frame = 0

Query:    1 EKSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            +KSRNKE+ +LF++GVG HHAGMLR+DRGLTER L  +   +VLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:  732 QKSRNKEVAELFESGVGIHHAGMLRADRGLTER-LFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRP 824

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A7C8ZAS7_OPUST (RNA helicase (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8ZAS7_OPUST)

HSP 1 Score: 125 bits (314), Expect = 1.650e-33
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRNKEL  LF  G+G HHAGMLR+DR LTER L      +VLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:   60 KSRNKELVGLFDNGIGIHHAGMLRADRALTER-LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRP 151

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A0K9PNS5_ZOSMR (Activating signal cointegrator 1 complex subunit n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9PNS5_ZOSMR)

HSP 1 Score: 130 bits (328), Expect = 2.510e-33
Identity = 63/93 (67.74%), Postives = 75/93 (80.65%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRN+EL +LFQ+GVG HHAGMLR+DR LTER L  +   +VLVCTATLAWGVNLPAHTV+IKGT++YNP+ GG +DL MLDV+Q      RP
Sbjct:  731 KSRNRELVELFQSGVGIHHAGMLRADRRLTER-LFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYNPKAGGWRDLGMLDVMQIFGRAGRP 822

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A6P6X8H6_COFAR (DExH-box ATP-dependent RNA helicase DExH14-like n=5 Tax=Magnoliopsida TaxID=3398 RepID=A0A6P6X8H6_COFAR)

HSP 1 Score: 130 bits (328), Expect = 2.520e-33
Identity = 62/93 (66.67%), Postives = 75/93 (80.65%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRNKE+ DLF+ G+G HHAGMLR+DRGLTER L  +   +VLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:  901 KSRNKEVVDLFENGIGIHHAGMLRADRGLTER-LFSEGLLKVLVCTATLAWGVNLPAHTVVIKGTQIYDPKAGGWRDLGMLDVMQIFGRAGRP 992

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: UPI001FB1515F (DExH-box ATP-dependent RNA helicase DExH14-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB1515F)

HSP 1 Score: 129 bits (325), Expect = 6.330e-33
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRNKEL  LF++GVG HHAGMLR+DRGLTER L      +VLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:  721 KSRNKELVQLFESGVGIHHAGMLRADRGLTER-LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRP 812

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A5P1E6H2_ASPOF (Uncharacterized protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1E6H2_ASPOF)

HSP 1 Score: 129 bits (325), Expect = 6.380e-33
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRNKEL +LF  G+G HHAGMLR+DRGLTER L  +   +VLVCTATLAWGVNLPAHTVIIKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:  723 KSRNKELVELFDYGIGIHHAGMLRADRGLTER-LFSRGLLKVLVCTATLAWGVNLPAHTVIIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRP 814

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: UPI001FB16149 (DExH-box ATP-dependent RNA helicase DExH14 n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB16149)

HSP 1 Score: 129 bits (325), Expect = 6.380e-33
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRNKEL  LF++GVG HHAGMLR+DRGLTER L      +VLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:  721 KSRNKELVQLFESGVGIHHAGMLRADRGLTER-LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWRDLGMLDVMQIFGRAGRP 812

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BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Match: A0A059CZQ1_EUCGR (Uncharacterized protein n=4 Tax=Myrtoideae TaxID=1699513 RepID=A0A059CZQ1_EUCGR)

HSP 1 Score: 129 bits (325), Expect = 6.380e-33
Identity = 63/93 (67.74%), Postives = 74/93 (79.57%), Query Frame = 0

Query:    2 KSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATLAWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP 94
            KSRNK+L  LF+AGVG HHAGMLR+DRGLTER L      +VLVCTATLAWGVNLPAHTV+IKGT++Y+P+ GG +DL MLDV+Q      RP
Sbjct:  731 KSRNKDLVQLFEAGVGVHHAGMLRADRGLTER-LFSDGLLKVLVCTATLAWGVNLPAHTVVIKGTQLYDPKAGGWKDLGMLDVMQIFGRAGRP 822

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig9137.20082.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FN81_ECTSI	1.410e-43	85.11	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A835Z6M6_9STRA	3.480e-38	76.34	Sec63 Brl domain-containing protein n=1 Tax=Tribon...	[more]
A0A4Y7JGA1_PAPSO	1.350e-33	65.96	Uncharacterized protein n=3 Tax=Papaver somniferum...	[more]
A0A7C8ZAS7_OPUST	1.650e-33	65.59	RNA helicase (Fragment) n=1 Tax=Opuntia streptacan...	[more]
A0A0K9PNS5_ZOSMR	2.510e-33	67.74	Activating signal cointegrator 1 complex subunit n...	[more]
A0A6P6X8H6_COFAR	2.520e-33	66.67	DExH-box ATP-dependent RNA helicase DExH14-like n=...	[more]
UPI001FB1515F	6.330e-33	67.74	DExH-box ATP-dependent RNA helicase DExH14-like n=...	[more]
A0A5P1E6H2_ASPOF	6.380e-33	67.74	Uncharacterized protein n=1 Tax=Asparagus officina...	[more]
UPI001FB16149	6.380e-33	67.74	DExH-box ATP-dependent RNA helicase DExH14 n=1 Tax...	[more]
A0A059CZQ1_EUCGR	6.380e-33	67.74	Uncharacterized protein n=4 Tax=Myrtoideae TaxID=1...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001650	Helicase, C-terminal	SMART	SM00490	helicmild6	coord: 2..91 e-value: 0.0022 score: 27.2
None	No IPR available	GENE3D	3.40.50.300		coord: 2..90 e-value: 6.0E-33 score: 116.1
None	No IPR available	PANTHER	PTHR12131:SF16	ACTIVATING SIGNAL COINTEGRATOR 1 COMPLEX SUBUNIT 3	coord: 2..93
None	No IPR available	PANTHER	PTHR12131	ATP-DEPENDENT RNA AND DNA HELICASE	coord: 2..93
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 4..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig9137	contig	S-firma_M_contig9137:2730..3755 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig9137.20082.1	mRNA_S-firma_M_contig9137.20082.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig9137 2730..3755 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig9137.20082.1 ID=prot_S-firma_M_contig9137.20082.1|Name=mRNA_S-firma_M_contig9137.20082.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=94bp
EKSRNKELRDLFQAGVGCHHAGMLRSDRGLTERALTMKSFKQVLVCTATL
AWGVNLPAHTVIIKGTEVYNPEKGGLQDLSMLDVLQASATGDRP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR001650	Helicase_C