prot_S-firma_M_contig9121.20073.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9121.20073.1
Unique Nameprot_S-firma_M_contig9121.20073.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length211
Homology
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BLAST of mRNA_S-firma_M_contig9121.20073.1 vs. uniprot
Match: D8LG15_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG15_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 1.810e-8
Identity = 34/54 (62.96%), Postives = 42/54 (77.78%), Query Frame = 0 
Query:  158 LVVPPIAVKREREFIERLLRKVEAEDVLDRQRAKEQHERVAAQRGRLRKKVRLC 211
            +VVPP+AV+RE+EFIERLLRKV+ EDV  R+RA+ Q ERV AQR  +R K   C
Sbjct:    1 MVVPPVAVEREKEFIERLLRKVKEEDVEARERARMQDERVVAQRESMRVKTGGC 54
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BLAST of mRNA_S-firma_M_contig9121.20073.1 vs. uniprot
Match: A0A7S2W823_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W823_9STRA)

HSP 1 Score: 55.1 bits (131), Expect = 2.080e-5
Identity = 42/119 (35.29%), Postives = 60/119 (50.42%), Query Frame = 0 
Query:   90 QNFLKEDEVLRCARAAPIVPXXXXTTPLRATRELPHQKRSQIPKDWAFYKRNGFIWSDLGRTPKARLALVVPPIAVKREREFIERLLRKVEAEDVLDRQRAKEQHERVAAQRGRLRKKV 208
            +N+ KE +     R++P +P        R +R   HQK     KD A+Y+R GF+WSDL   P  R  LV+P  A K ERE I  +L  ++ ED     +     +R A QR   R+K+
Sbjct:   60 ENYQKEVKSGTVCRSSPRLPRESP----RGSRHT-HQK-----KDAAYYRRRGFLWSDLVHCPPERAPLVIPARAYKGERELIVHVLNLLDEEDAAQEAQEIRIQQRAAVQRKVQREKI 168
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9121.20073.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LG15_ECTSI1.810e-862.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2W823_9STRA2.080e-535.29Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 187..207

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9121contigS-firma_M_contig9121:2091..3313 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9121.20073.1mRNA_S-firma_M_contig9121.20073.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9121 2091..3313 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9121.20073.1 ID=prot_S-firma_M_contig9121.20073.1|Name=mRNA_S-firma_M_contig9121.20073.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=211bp
TRDCASHYILPRNHTTTEYAHAADDMKRGYPAAQRGERLRLVSANDREAE
HARMVQVHQDEEDRRARHKLRRRAIKKRDLLHKFQCRRLQNFLKEDEVLR
CARAAPIVPPPPPTTPLRATRELPHQKRSQIPKDWAFYKRNGFIWSDLGR
TPKARLALVVPPIAVKREREFIERLLRKVEAEDVLDRQRAKEQHERVAAQ
RGRLRKKVRLC
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