prot_S-firma_M_contig9117.20062.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9117.20062.1
Unique Nameprot_S-firma_M_contig9117.20062.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length119
Homology
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BLAST of mRNA_S-firma_M_contig9117.20062.1 vs. uniprot
Match: D7G8Q7_ECTSI (Peptidylprolyl isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q7_ECTSI)

HSP 1 Score: 130 bits (326), Expect = 2.190e-34
Identity = 66/115 (57.39%), Postives = 83/115 (72.17%), Query Frame = 0 
Query:    2 LDAVGFRAGPPWVCREGIRSRDTCVTTAAWRGKGEPRGKEQEATNRIDLAAPCSRKDVLHSMGLIGSAIVCGQALAERTEAADVRQAE-VPTVGKITKTGVKYFDYRVGEGPTPR 115
            L+ +GFRA P WV      SR+TCV   A RG GE RG+ +E     +   PCSR D+L SMGL+GSA++ GQAL+ER EAA +++ E VPTVGKITK G+KYFD+RVGEGP+PR
Sbjct:   27 LEVLGFRASP-WVRSTATVSRETCVALPAGRGDGEWRGEGREPETGGNTGVPCSRMDLLRSMGLVGSAVIGGQALSERAEAAGMQEEEEVPTVGKITKAGIKYFDFRVGEGPSPR 140
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9117.20062.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G8Q7_ECTSI2.190e-3457.39Peptidylprolyl isomerase n=1 Tax=Ectocarpus silicu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9117contigS-firma_M_contig9117:2623..3565 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9117.20062.1mRNA_S-firma_M_contig9117.20062.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9117 2365..3565 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9117.20062.1 ID=prot_S-firma_M_contig9117.20062.1|Name=mRNA_S-firma_M_contig9117.20062.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=119bp
SLDAVGFRAGPPWVCREGIRSRDTCVTTAAWRGKGEPRGKEQEATNRIDL
AAPCSRKDVLHSMGLIGSAIVCGQALAERTEAADVRQAEVPTVGKITKTG
VKYFDYRVGEGPTPRCVR*
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