prot_S-firma_M_contig908.20022.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig908.20022.1
Unique Nameprot_S-firma_M_contig908.20022.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length414
Homology
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BLAST of mRNA_S-firma_M_contig908.20022.1 vs. uniprot
Match: A0A6H5KCP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP8_9PHAE)

HSP 1 Score: 195 bits (495), Expect = 2.250e-52
Identity = 95/112 (84.82%), Postives = 105/112 (93.75%), Query Frame = 0 
Query:    1 MMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLDYVTKNLASVVATDSDVDIVLDASTIHGSYSLPLHSRGVYDD----PLQQHQ 108
            MMHDHFL+RPQW+QKKVVSIGDSNEEKVAMRIASGQHGTM AK+VKFITGPDPEAL+CQLD+VTK+LASV++++SDVDIVLDAS IHGSYSLPLHSRGVYDD    P QQHQ
Sbjct:  214 MMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMEAKSVKFITGPDPEALACQLDFVTKHLASVLSSNSDVDIVLDASMIHGSYSLPLHSRGVYDDVHQQPQQQHQ 325
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BLAST of mRNA_S-firma_M_contig908.20022.1 vs. uniprot
Match: D7FZF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZF4_ECTSI)

HSP 1 Score: 194 bits (492), Expect = 4.780e-52
Identity = 93/106 (87.74%), Postives = 103/106 (97.17%), Query Frame = 0 
Query:    1 MMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLDYVTKNLASVVATDSDVDIVLDASTIHGSYSLPLHSRGVYDDPLQQ 106
            MMHDHFL+RPQW+QKKVVSIGDSNEEKVAMRIASGQHGTMAAK+VKFITGPDPEAL+CQLD+VTK+LASV++++SDVDIVLDAS IHGSYSLPLHSRGVYDD  QQ
Sbjct:  187 MMHDHFLERPQWMQKKVVSIGDSNEEKVAMRIASGQHGTMAAKSVKFITGPDPEALACQLDFVTKHLASVLSSNSDVDIVLDASMIHGSYSLPLHSRGVYDDLHQQ 292
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BLAST of mRNA_S-firma_M_contig908.20022.1 vs. uniprot
Match: A0A7S2CXF5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CXF5_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 8.460e-6
Identity = 32/90 (35.56%), Postives = 58/90 (64.44%), Query Frame = 0 
Query:   15 KKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLDYVTKNLASVVATDSDVDIVLDASTIHGSYSLPLHSRG-VYDDP 103
            ++++S GDSNEE+ A++IA+GQ     AK++KF+  P+PE L  Q++ VT  L  V +  +++D++L +++  G    P+ +   V D+P
Sbjct:  193 REIISFGDSNEERTAVKIAAGQLDA-TAKSIKFVDLPNPEQLRKQVETVTSWLTWVCSHTAELDLMLMSNSTSGMAPKPVAATSDVADEP 281
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BLAST of mRNA_S-firma_M_contig908.20022.1 vs. uniprot
Match: A0A836CF50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF50_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 1.420e-5
Identity = 28/56 (50.00%), Postives = 39/56 (69.64%), Query Frame = 0 
Query:   15 KKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITGPDPEALSCQLDYVTKNLASV 70
            K VVSIGDS EE+ A+RIA+ QH  +++  VKF+  P P AL+ +LD VT  L ++
Sbjct:  115 KLVVSIGDSEEERAAVRIAAAQHAMISSCTVKFLPQPMPRALAVELDMVTTQLRAL 170
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig908.20022.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KCP8_9PHAE2.250e-5284.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FZF4_ECTSI4.780e-5287.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2CXF5_9STRA8.460e-635.56Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A836CF50_9STRA1.420e-550.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig908contigS-firma_M_contig908:24991..26634 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig908.20022.1mRNA_S-firma_M_contig908.20022.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig908 24991..26655 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig908.20022.1 ID=prot_S-firma_M_contig908.20022.1|Name=mRNA_S-firma_M_contig908.20022.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=414bp
MMHDHFLDRPQWVQKKVVSIGDSNEEKVAMRIASGQHGTMAAKAVKFITG
PDPEALSCQLDYVTKNLASVVATDSDVDIVLDASTIHGSYSLPLHSRGVY
DDPLQQHQHQHQQHLRQQSSSSAPSTPFSCRGSSSSSSSCSGTANPSPLC
TTTPARPASSPQVCSTARSASASASPPDAAAGPATVAAAASCHDGARPST
AVSSSSSSSSSSSEGSAGAKGEEPTTAAFDQAGRRRSSSSRSGGAAGSDA
TTASSLSSSAPPSPQHLALKRRASSSPIPIPPAGHGPGHGRVGGGSSSSS
ASASANGKGSGSPGVEGGGDCAQPFPASPTEVGGPLSSYSSLSRAAAAER
KFLEVSPSPTSSASCGDGDGEAMALSPVSLVDGGCSVRGGDGGGGAEGGC
GTSAFGGGSPCPVD
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