prot_S-firma_M_contig9071.20012.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9071.20012.1
Unique Nameprot_S-firma_M_contig9071.20012.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length331
Homology
BLAST of mRNA_S-firma_M_contig9071.20012.1 vs. uniprot
Match: A0A6H5JZ55_9PHAE (C2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ55_9PHAE)

HSP 1 Score: 258 bits (659), Expect = 2.730e-78
Identity = 178/337 (52.82%), Postives = 203/337 (60.24%), Query Frame = 0
Query:    1 HKIGECRSSTHTDGGKNPTWENTKRSVFTFYVPATVTLDSLSVVLDVINDNIVADSFIGTTGTIALAQAATGDAKWWNVTTGGTIQAAIELVTADSHRAAXXXXXXXXXXXXXXXXXXXXXXAPTNYTGSGGGYXXXXXXXXXXXXXXGRSPVANPSPHVPVAHATPST-----NVYGGAPVAAPTGDPAPPAYEVRQHLVHAAQKYRLPPVAPGATAPPSDGAGG--HDKSNQYNGYGXXXXXXXAA----------PLPEARAVPVVGGIPGDDPFNARGAAAAAAAXXXXXP--YGXXXXXXXTYGAG-RSNAAAGIAGTGMYPSLPAYPAPSA 317
            HKIGECRSSTHTDGG+NPTW+N  +SVFTFYVPATVTLD+L+VVLDV+NDN+VADS IGTTG+I L  AATG++KWWN+++GGTIQA IEL+T +S                          A +    SGG Y              GR    NP PHV VAHATP       N YGGA   A      PP+YE     V  A  YR PPVAPGAT  P+   GG  ++K NQY GY XXXXXXX            PLPEA+AVP VGG+ GDDPFNARGAAA AA      P  Y           AG RSNAAAGIAGTG YPSL ++PAPS+
Sbjct:  220 HKIGECRSSTHTDGGRNPTWQNMAKSVFTFYVPATVTLDTLAVVLDVVNDNLVADSIIGTTGSIGLQTAATGESKWWNISSGGTIQAIIELITPESGGGGGTGTHPNTAYSRNSAAAADPAVASSRP--SGGSYGG------------GRVATVNPPPHVAVAHATPVAAGAPGNAYGGAAPGAMAMSNPPPSYESH---VAVASSYRPPPVAPGATPAPAGPHGGAAYEKWNQY-GYXXXXXXXXXXXXXXXXXXXXPLPEAKAVPYVGGVAGDDPFNARGAAATAATGGGARPSPYSAGAYGGAAATAGVRSNAAAGIAGTGAYPSLSSHPAPSS 538          
BLAST of mRNA_S-firma_M_contig9071.20012.1 vs. uniprot
Match: D8LMN7_ECTSI (C2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN7_ECTSI)

HSP 1 Score: 231 bits (589), Expect = 1.010e-68
Identity = 166/287 (57.84%), Postives = 188/287 (65.51%), Query Frame = 0
Query:    1 HKIGECRSSTHTDGGKNPTWENTKRSVFTFYVPATVTLDSLSVVLDVINDNIVADSFIGTTGTIALAQAATGDAKWWNVTTGGTIQAAIELVTADSHRAAXXXXXXXXXXXXXXXXXXXXXXAPTNYTGSGGGYXXXXXXXXXXXXXXGRSPVANPSPHVPVAHATPST-----NVYGGA-PVAAPTGDPAPPAYEVRQHLVHAAQKYRLPPVAPGATAPPSDGAGG--HDKSNQYNGYGXXXXXXXA---------------APLPEARAVPVVGGIPGDDPFNAR 264
            HKIGECRSSTHTDGG+NPTW+N  RSVFTFYVPATVTL++L+VVLDV+NDN+VADS IGTTG+I L  AATG++KWWNV++GGT+QA IEL+T +S    XXXXX          XXXXXX A  +   SGG Y              GR    NPSPHV VAHATP       N YGGA PVA    DP PP+YE  Q  V  A  YR PPVAPGA   P+   GG  ++KSNQY GYGXXXXX X                APLPEA+AVP VGG+ GDDPFNAR
Sbjct:  202 HKIGECRSSTHTDGGRNPTWQNMARSVFTFYVPATVTLETLAVVLDVVNDNLVADSIIGTTGSIGLKTAATGESKWWNVSSGGTLQAIIELITPES--GGXXXXXTHPNIAYSRSXXXXXXPAVASSRPSGGSYNG------------GRVATVNPSPHVAVAHATPVAAGAPGNAYGGATPVATAMSDP-PPSYE--QSHVAVASSYRPPPVAPGAAPAPAVPHGGAAYEKSNQY-GYGXXXXXYXXXXXXXRGNAXXXXXXAPLPEAKAVPYVGGVAGDDPFNAR 470          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9071.20012.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZ55_9PHAE2.730e-7852.82C2 domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LMN7_ECTSI1.010e-6857.84C2 domain-containing protein n=1 Tax=Ectocarpus si... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9071contigS-firma_M_contig9071:1736..3926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9071.20012.1mRNA_S-firma_M_contig9071.20012.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9071 1736..3926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9071.20012.1 ID=prot_S-firma_M_contig9071.20012.1|Name=mRNA_S-firma_M_contig9071.20012.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=331bp
HKIGECRSSTHTDGGKNPTWENTKRSVFTFYVPATVTLDSLSVVLDVIND
NIVADSFIGTTGTIALAQAATGDAKWWNVTTGGTIQAAIELVTADSHRAA
AAAAAAPSQPRYPTTSSPAAAAAPTNYTGSGGGYGGGYGGSYGGSYGGGR
SPVANPSPHVPVAHATPSTNVYGGAPVAAPTGDPAPPAYEVRQHLVHAAQ
KYRLPPVAPGATAPPSDGAGGHDKSNQYNGYGGGGGGGGAAPLPEARAVP
VVGGIPGDDPFNARGAAAAAAAAAGAAPYGAAPAPAATYGAGRSNAAAGI
AGTGMYPSLPAYPAPSAYQQQQQQQQQQQYQ
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