prot_S-firma_M_contig907.20011.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig907.20011.1
Unique Name	prot_S-firma_M_contig907.20011.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	582

Homology

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BLAST of mRNA_S-firma_M_contig907.20011.1 vs. uniprot
Match: D7FV86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV86_ECTSI)

HSP 1 Score: 613 bits (1582), Expect = 8.250e-213
Identity = 352/540 (65.19%), Postives = 395/540 (73.15%), Query Frame = 0

Query:   29 GSSPSALSFLERSHRSESSSLPAT-----WPAGFVPPPKTDRDRDRTAHASSTHIPRLPRTSALAFLERPPIGGAGASTNSIVTGAGAEAGLGSLSGGVMATGSGRGGFLPRAHSSIGGSGSEDSDELDELDSDICPSMLFSCFPCLTWFRPTKTRWQPDLLDGGSMDNMGGSSNSIKRNSRTNKGLGRPLLVDQPLPPQDQDFPKDVKLIEVEVESARNLPLGERVNMADLAGTYAILRVTPAQEGVGEQAEMTSLATRPVNPSWGGRETFTFFVTDTGNSKAFLAIQILYRPLRSPSSSSFDQQHQRPPSLRRETSGSSTSPPRSLSLPGSLPGDVVIGEGFVDLLGLFPVVDGTYTPGALKGNSRRVAVPMREPEGKTRTKCSVMLGLRCRRVNETIDTHEDRIYEYERWTKVAGWSTSGKRREGKWSTLDGTVLSDTFADVAPPARINAEVVLPWCPFGGWEYSRVEEEKSPSPSARTTRTPSKTSTSRSGERDDDSPTSGAEGWDNFAVAQKGAVWMEGYVQGYQAVRRRLWRRV 563
            G S +ALSFLERS RS  S   A      WP GFVPP  T  +R  T   S ++ P LPRTSALAFLER P    G   N+IV GAGAE GLG+LSGG++A G+ RGGFLPR + +    GSE SD   E DSDICPSML+SCFPC  W R  K R   DLLDGG        +NS+KR SR    L  PLL +QP  P   +FP DVKLIEVEVESARNLPLGERVNMADLAGTYAILR+TP QEGVGEQ   TSLATRPVNPSWGGRETFTFFVTD   SKAFL++Q+LYRPLR P +    Q  Q P  LRR  S +S +   S    GS  GDV I EGFVDLLGLF +VDGTYTPG +KGN+RRVAVPMREP+GK RT+CSVMLGLRCRRVNETIDT EDR+YEYERWT+VAGWST+GK+R GKWSTLDG+VLSD FADVAP    + EVVLPWCPFGGWEYSR EE  +P+ +  T      TS +  G RD+ +P+ GA+ W+NFAVAQKGAVWMEGYVQG QAVRRRLWRRV
Sbjct:   91 GRSSNALSFLERSDRSTDSPTVAAATTNPWPVGFVPPQGTKSNR--TTGWSQSYTPYLPRTSALAFLERAPGRARG---NNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPYDT----GSECSDA--EEDSDICPSMLYSCFPCFNWSRRGKRR-PADLLDGGL-------ANSVKRESRAQLSLSTPLLTEQP--PSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRPPPA---PQPLQPPLPLRRGASEASLASVSS----GSRHGDVTIAEGFVDLLGLFSLVDGTYTPGTMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDRLYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEE--TPASAGNTG-----TSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRV 595

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig907.20011.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig907.20011.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FV86_ECTSI	8.250e-213	65.19	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SUPERFAMILY	49562	C2 domain (Calcium/lipid-binding domain, CaLB)	coord: 231..314

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig907	contig	S-firma_M_contig907:18129..25750 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig907.20011.1	mRNA_S-firma_M_contig907.20011.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig907 17673..25868 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig907.20011.1 ID=prot_S-firma_M_contig907.20011.1|Name=mRNA_S-firma_M_contig907.20011.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=582bp
MAESKRRDGPTVVRNSPGAVVRRSTEPSGSSPSALSFLERSHRSESSSLP
ATWPAGFVPPPKTDRDRDRTAHASSTHIPRLPRTSALAFLERPPIGGAGA
STNSIVTGAGAEAGLGSLSGGVMATGSGRGGFLPRAHSSIGGSGSEDSDE
LDELDSDICPSMLFSCFPCLTWFRPTKTRWQPDLLDGGSMDNMGGSSNSI
KRNSRTNKGLGRPLLVDQPLPPQDQDFPKDVKLIEVEVESARNLPLGERV
NMADLAGTYAILRVTPAQEGVGEQAEMTSLATRPVNPSWGGRETFTFFVT
DTGNSKAFLAIQILYRPLRSPSSSSFDQQHQRPPSLRRETSGSSTSPPRS
LSLPGSLPGDVVIGEGFVDLLGLFPVVDGTYTPGALKGNSRRVAVPMREP
EGKTRTKCSVMLGLRCRRVNETIDTHEDRIYEYERWTKVAGWSTSGKRRE
GKWSTLDGTVLSDTFADVAPPARINAEVVLPWCPFGGWEYSRVEEEKSPS
PSARTTRTPSKTSTSRSGERDDDSPTSGAEGWDNFAVAQKGAVWMEGYVQ
GYQAVRRRLWRRVYLDRGSAGEAGAAVPPPL*