prot_S-firma_M_contig9062.20003.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig9062.20003.1
Unique Name	prot_S-firma_M_contig9062.20003.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	214

Homology

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BLAST of mRNA_S-firma_M_contig9062.20003.1 vs. uniprot
Match: A0A6H5KRF9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRF9_9PHAE)

HSP 1 Score: 269 bits (687), Expect = 6.470e-87
Identity = 159/241 (65.98%), Postives = 166/241 (68.88%), Query Frame = 0

Query:    2 TEARAVAVARCMSAGEGCRSELRSKAVLALANAASFPFSEGLRDLVQEALTWGGALDEELRRAATTLALSQIVQRYHVTGFNLVDAHRATRLLRHVLAQVRCPTALDDGLQIASAYSHLSERDVYVEFLENLAGSYP----------------------------VVQAPGXXXXXXXXXXXXRQLAADLTTHRGRVADVLRRLPAGDARRVAEEVLLYLVRLLEDLELDAVTAGLNPGHL 214
            TE RAVAVARCMS GEGCRSELRS+AVLALANAASFPFSEGLR+LVQEAL+WGGALD ELRRAATTL+LSQIVQRYHV GFNLVDA RATRLLRHVLAQV            A AYSHLSE +VYVEFLENLAGSYP                            + +  G              L  DL  HR RVA VL RLP GDARRVAEEVLLYLVRLLEDLELDA TAGL PG L
Sbjct:   38 TEQRAVAVARCMSPGEGCRSELRSRAVLALANAASFPFSEGLRELVQEALSWGGALDAELRRAATTLSLSQIVQRYHVKGFNLVDAPRATRLLRHVLAQV------------AHAYSHLSETNVYVEFLENLAGSYPGRGSADPDAAXXXXXXXXXXXXXXXSGIISEISGKAGPGRGRSCSGGSLTTDLAAHRVRVAGVLHRLPVGDARRVAEEVLLYLVRLLEDLELDAGTAGLKPGQL 266

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BLAST of mRNA_S-firma_M_contig9062.20003.1 vs. uniprot
Match: D8LSU3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSU3_ECTSI)

HSP 1 Score: 259 bits (662), Expect = 3.300e-76
Identity = 154/238 (64.71%), Postives = 162/238 (68.07%), Query Frame = 0

Query:    2 TEARAVAVARCMSAGEGCRSELRSKAVLALANAASFPFSEGLRDLVQEALTWGGALDEELRRAATTLALSQIVQRYHVTGFNLVDAHRATRLLRHVLAQVRCPTALDDGLQIASAYSHLSERDVYVEFLENLAGSYP-------------------------VVQAPGXXXXXXXXXXXXRQLAADLTTHRGRVADVLRRLPAGDARRVAEEVLLYLVRLLEDLELDAVTAGLNPGHL 214
            TE RAVAVARCMS GEGCRSELRS+AVLALANAASFPFSEGLRDLVQEAL+WGGALD ELRRAATTL+LSQIVQ                   RHVLAQV+CPTALDDGLQ+A AYSHLSE +VYVEFLENLAGSY                          + +  G              LAADL  HR RVA VL RLPAGDARRVAEEVLLYLVRLLEDLELDA  AGL PG L
Sbjct: 1117 TEQRAVAVARCMSPGEGCRSELRSRAVLALANAASFPFSEGLRDLVQEALSWGGALDAELRRAATTLSLSQIVQ-------------------RHVLAQVQCPTALDDGLQVAHAYSHLSETNVYVEFLENLAGSYAGRGSADPDXXXXXXXXXXXXXXXGIISEISGKAGPGRGRSCGGGSLAADLAAHRVRVAGVLHRLPAGDARRVAEEVLLYLVRLLEDLELDAGAAGLKPGQL 1335

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig9062.20003.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig9062.20003.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KRF9_9PHAE	6.470e-87	65.98	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LSU3_ECTSI	3.300e-76	64.71	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR15688	KINETOCHORE-ASSOCIATED PROTEIN 1	coord: 2..194

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig9062	contig	S-firma_M_contig9062:1898..4053 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig9062.20003.1	mRNA_S-firma_M_contig9062.20003.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig9062 1898..4068 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig9062.20003.1 ID=prot_S-firma_M_contig9062.20003.1|Name=mRNA_S-firma_M_contig9062.20003.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=214bp
MTEARAVAVARCMSAGEGCRSELRSKAVLALANAASFPFSEGLRDLVQEA
LTWGGALDEELRRAATTLALSQIVQRYHVTGFNLVDAHRATRLLRHVLAQ
VRCPTALDDGLQIASAYSHLSERDVYVEFLENLAGSYPVVQAPGGGGGGG
GESGGGRQLAADLTTHRGRVADVLRRLPAGDARRVAEEVLLYLVRLLEDL
ELDAVTAGLNPGHL