prot_S-firma_M_contig904.19975.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_S-firma_M_contig904.19975.1
Unique Name	prot_S-firma_M_contig904.19975.1
Type	polypeptide
Organism	Sphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length	791

Homology

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BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot
Match: D7G0Z5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z5_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 4.730e-24
Identity = 136/330 (41.21%), Postives = 158/330 (47.88%), Query Frame = 0

Query:  299 HESVH-SEEARPPRVRHDQGMA----PSPSMGVLKPRGLDALSS----SFGGEDEEEEELPWCLRELLLLDALVLTFGAGRWEVVSRQLNNRSPAQCERMWALRGSRP---------YSHHHYRNDSSGSLTATSAAPIGDGGGPGAASAVGPGSPADDKGVSYRWGLPVAEHHHDDRRFPASMAPSHGDVVRAVEARKERAAAEAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVSPGVLDEGSVSSPARSCAMGPGKSGXXXXXXXGVVTPSRVAGGVWPPFESTGGGGA--GASGRGPNGVRPWKKEEDDRFNALVAMFGRKWN 608
            H+  H S +AR PR   DQG+A    PSPSMGV +PRGLD  S     S GGED+EEE  PW  RE+ LL+ALV  FG+GRW+ VS   NNRSP QC R WAL G+RP          S +                                 SPA   GVSYRWG+PVAEH                                   XXXXXXXXXXXXXXXXXXX            + GVL +    SP +   +   + G  XXXXX          G  P F S GG G   G++GRGP GV  W K+EDDR NALV +FG KW+
Sbjct:  345 HQRSHCSNQARVPR---DQGIASSPSPSPSMGVSRPRGLDNQSPREGMSSGGEDDEEE--PWSAREVELLEALVRNFGSGRWDEVSVHFNNRSPTQCARKWALGGTRPPYPTVPPSELSRNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAG--GVSYRWGVPVAEHXXXXXXXXXXXXXXXXXXX----------------XXXXXXXXXXXXXXXXXXXTASQPEARGPAAARGVLQQRGYPSPTQPSPLLLQRKGSSXXXXXXXXXXXXXXSGALP-FGSPGGVGVATGSTGRGPKGVGSWTKDEDDRLNALVGIFGVKWS 650

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BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot
Match: A0A6H5L2W7_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2W7_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 8.690e-20
Identity = 58/95 (61.05%), Postives = 66/95 (69.47%), Query Frame = 0

Query:  311 RVRHDQGMA----PSPSMGVLKPRGLDALSS----SFGGEDEEEEELPWCLRELLLLDALVLTFGAGRWEVVSRQLNNRSPAQCERMWALRGSRP 397
            RV  DQG+A    PSPSMGV +PRGLD  SS    S GGED+EEE  PW  RE+ LL+ALV  FG+GRW+ VS   NNRSP QC R WAL G+RP
Sbjct:  733 RVPRDQGIASSPSPSPSMGVARPRGLDNQSSREGMSSGGEDDEEE--PWSAREVELLEALVRNFGSGRWDQVSVHFNNRSPTQCARKWALGGTRP 825

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BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot
Match: A0A6H5K1S7_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1S7_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 1.610e-8
Identity = 54/118 (45.76%), Postives = 63/118 (53.39%), Query Frame = 0

Query:  610 SGTLVSQQLMQYQQQLQGQGQQ-----------RSRNPFGSVAGGPSPEQSPSPVPHQQIPEFSY--GGAPGSMGRSSGDRWMSGRGGGGAGCGQQGVLDKGSSDQGGAVGAGGSAWG 714
            SG+L+SQQLMQYQQ                   RSR PFGSVA G  PEQ PSP PHQQ+ + SY  GG  G  G  SG+RWMS           +G+ D+G+   G     GGSAWG
Sbjct: 1196 SGSLLSQQLMQYQQXXXXXXXXXXXXXXXXXXXRSRTPFGSVAAGRPPEQPPSPAPHQQLADSSYAIGGGGGGAGIPSGERWMSR-------STMEGIPDQGTMGTG-----GGSAWG 1301

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BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot
Match: D8LMN6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMN6_ECTSI)

HSP 1 Score: 58.9 bits (141), Expect = 2.320e-6
Identity = 47/136 (34.56%), Postives = 66/136 (48.53%), Query Frame = 0

Query:  130 IRLQNGSRRWVSYFVLQEDKLRTTAIKRNVENTMLASLNASAFNGGGARAEVSRSAA------VNATEE-PSPYYLVEDYRVPPSEVPGISDFDVVGTTVKFPKGCKQLRVYA--WLKGKDEWVLYRNKVYFKKRG 256
            + L+N S   VSY+V+ EDKL T A+KR V   +   LN    +GG  R       A      +NA       Y+L  DYR   +              ++FPKG +QLRVYA  W + + EW ++R+KV+   RG
Sbjct:   33 LELRNESDYRVSYWVVNEDKLTTAAVKRRVFRNIEDQLN----DGGSYRTNAKHHNAKHGWDVINAEHALDDEYFLRRDYRPDAA----------TAKKLRFPKGSRQLRVYAYAWFEKQKEWRVFRDKVFDNGRG 154

[Close]

BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot
Match: A0A6H5KW90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KW90_9PHAE)

HSP 1 Score: 54.7 bits (130), Expect = 9.240e-5
Identity = 48/160 (30.00%), Postives = 68/160 (42.50%), Query Frame = 0

Query:  130 IRLQNGSRRWVSYFVLQEDKLRTTAIKRNVENTMLASLNASAFNG------------------------------------GGARAEVSRSAAVNATEEPSPYYLVEDYRVPPSEVPGISDFDVVGTTVKFPKGCKQLRVYAWLKGKD--EWVLYRNKVY 251
            I + N S   VSY+V QE K++T A++  V +TM   LN  A  G                                       RA+  ++     TE    Y+L++D+R+ P             TTV FP+GCK LRVYA+ + KD   W  Y++KVY
Sbjct:   18 INVANNSDYKVSYWVEQECKMKTRAVQETVVSTMDTKLNGKAKIGDDGXXXXXXXXXXXXXXXXXXXXXXXXXXXPGAEVRAAKRAKTEKTVCTEKTEVS--YFLMKDHRMEPRR-------GTPPTTVYFPEGCKNLRVYAFFQAKDGQTWKSYKDKVY 168

The following BLAST results are available for this feature:

BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot

BLAST of mRNA_S-firma_M_contig904.19975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
D7G0Z5_ECTSI	4.730e-24	41.21	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L2W7_9PHAE	8.690e-20	61.05	MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 Ta...	[more]
A0A6H5K1S7_9PHAE	1.610e-8	45.76	Protein kinase domain-containing protein n=1 Tax=E...	[more]
D8LMN6_ECTSI	2.320e-6	34.56	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A6H5KW90_9PHAE	9.240e-5	30.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 789..790
None	No IPR available	COILS	Coil	Coil	coord: 474..494
None	No IPR available	GENE3D	1.10.10.60		coord: 343..392 e-value: 3.6E-5 score: 25.4
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 343..390 score: 7.329
IPR017877	Myb-like domain	PROSITE	PS50090	MYB_LIKE	coord: 587..608 score: 4.321
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 350..608

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
S-firma_M_contig904	contig	S-firma_M_contig904:19043..24479 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male	2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90	2022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_S-firma_M_contig904.19975.1	mRNA_S-firma_M_contig904.19975.1	Sphaerotrichia firma Sfir_13m male	mRNA	S-firma_M_contig904 18934..24742 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_S-firma_M_contig904.19975.1 ID=prot_S-firma_M_contig904.19975.1|Name=mRNA_S-firma_M_contig904.19975.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=791bp
MTCMFFSVMNGQSIHDLFEVMTGRDRTAEEDVGSGGRGMRPWMRFKRYQR
LTQLPTLHTSEEAMDQLRSSTPLGGSGSGAAPVPAAPRHRGRSPEDVNLD
TSRHSSLGGSSNHSQSSNEEKMPAKKTPAIRLQNGSRRWVSYFVLQEDKL
RTTAIKRNVENTMLASLNASAFNGGGARAEVSRSAAVNATEEPSPYYLVE
DYRVPPSEVPGISDFDVVGTTVKFPKGCKQLRVYAWLKGKDEWVLYRNKV
YFKKRGIIQVVTAVDEQLDGYDPPDQGPPDRGGYTSDLHLPLFGDGSDHE
SVHSEEARPPRVRHDQGMAPSPSMGVLKPRGLDALSSSFGGEDEEEEELP
WCLRELLLLDALVLTFGAGRWEVVSRQLNNRSPAQCERMWALRGSRPYSH
HHYRNDSSGSLTATSAAPIGDGGGPGAASAVGPGSPADDKGVSYRWGLPV
AEHHHDDRRFPASMAPSHGDVVRAVEARKERAAAEAAAESIAAEIAAAES
VAAAMAAMAATAATSDGPVSPGVLDEGSVSSPARSCAMGPGKSGGGGGGD
GGVVTPSRVAGGVWPPFESTGGGGAGASGRGPNGVRPWKKEEDDRFNALV
AMFGRKWNTSGTLVSQQLMQYQQQLQGQGQQRSRNPFGSVAGGPSPEQSP
SPVPHQQIPEFSYGGAPGSMGRSSGDRWMSGRGGGGAGCGQQGVLDKGSS
DQGGAVGAGGSAWGGSNSTRGLRRRRRGSSRSSEFYFVDPQQSGGTSGSY
TQPPPSLSLAAAAPAHAALKHGNFAAGRAAASGGASTPRA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR009057	Homeobox-like_sf
IPR017877	Myb-like_dom