prot_S-firma_M_contig9029.19964.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig9029.19964.1
Unique Nameprot_S-firma_M_contig9029.19964.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length496
Homology
BLAST of mRNA_S-firma_M_contig9029.19964.1 vs. uniprot
Match: D7G283_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G283_ECTSI)

HSP 1 Score: 338 bits (867), Expect = 7.050e-107
Identity = 243/566 (42.93%), Postives = 294/566 (51.94%), Query Frame = 0
Query:    3 YEGRLSGTTRTFRDPVEVDSINRRRSSPGVSGRMPPGATRTFREPSIRGLSGTTRTRDNGGADRKPAAATERQASSPPASNHRRASLQRWLSTKAISSIGKTGQRGGGRIQE---------GEERSWYHKEQPGFDSPGGGGVLGGDEADPGSSPATRKTELP--LEEDGTRVIAESNDSLHERQSTTAV---------QPTPSTVSRGRSSDNIIGGDDK-------------PLSNRGNIPTQVDDDTGS-----------------------------IEDIYDTPVGDGVPRQVAFLSGTMGLTVDISDPMQPQPPDEL----WQHQTAHDDREQFPASPCRRVILETSPRYGSLQIFRKEMARRGISAQMFHTGWKGSILPPRDIRLFLTDSRQKSALCWRYKKNTRGRGGG----EELGAEDRLASVIPLSSLANIGIAEPYQQSGSKGAGGRLSSWLPAPLSWKR--EGSVQGEKSKTVNKEVDSPEKNDPGTGLAE-VPVVALSYWVNGEPRWVGDKPKRFLVKPDSLDAFRSLTQGLRLCCLHFHNHSCPQDLEDIR 495
            Y  RL+G TRTFRDP+    +    ++ G S     G +R+  +  I            G +D  PA       +S   S+ RRASL  WL       + K G  GGG   +          E++   H E+  F     G      E+    +   R+  +   L E+G      S D++      TA              S  S G +S  + G D K             P S   +  T  DD+ G                              I DIY   V  G  R+V FLSGTMGLTVDISDPMQPQP DE      Q  T HDD +Q+PASPC  VIL+TSPRYG+LQ FRKEMA RGI+AQMFHTGWKGS LPPRDIRLF+TDSR+ S L WRYK    GRG      + LGAEDR   VIPLSSLANIG AE Y+Q G   +   L SWL  P S +R  E +  G      +K++DS +K     GL E VPV+ALSYWV GEPRWVGD+PKR LV+PDSLD+F+ L+ GLRLCCLHFHN+SCPQDLEDIR
Sbjct:   20 YSSRLAGATRTFRDPIISHGLETAGTAGGRSSTGRRGGSRSDMDRMI----------PEGASDSSPATTAGGNQTSTANSSSRRASLFEWL-------VAKKGTGGGGEFSQYMSAVECGSDEQQDAVHNEEQDF-----GRGFSDYESSMDMNSLRRQAAVVEVLAEEGATTTIPSIDNISSDPPLTAEALEHHTRTHSSGKSNRSEGSASAALNGNDTKHILAASAGRSLPRPRSTSKSSHTGSDDEAGDAVLPEFHQSHDEAQEELTIDEPTTPAAVDINDIYADDVTGGESRRVTFLSGTMGLTVDISDPMQPQPSDEFDREHRQQHTKHDDYDQWPASPCSGVILDTSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRGAAAGANQGLGAEDRR--VIPLSSLANIGPAELYRQ-GPPSSRRNLLSWLSIPSSLRRASEDAPVGYGKIQKDKDLDSVDKGT--AGLVEAVPVLALSYWVEGEPRWVGDQPKRLLVRPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR 558          
BLAST of mRNA_S-firma_M_contig9029.19964.1 vs. uniprot
Match: A0A6H5L7W7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7W7_9PHAE)

HSP 1 Score: 301 bits (772), Expect = 3.150e-92
Identity = 179/329 (54.41%), Postives = 208/329 (63.22%), Query Frame = 0
Query:  190 RGRSSDNIIGGDDK------PLSNRGNIPTQ----VDDDT----GSIEDIYDTPVGDGVPRQVAFLSGTMGLTVDISDPMQPQPPDELWQHQTAHDDREQF----PASPCRRVILETSPRYGSLQIFRKEMARRGISAQMFHTGWKGSILPPRDIRLFLTDSRQKSALCWRYKKNTRGR----GGGEELGAEDRLASVIPLSSLANIGIAEPYQQSGSKGAGGRLSSWLPAPLSWKREGSVQGEKSKTVNKEVDSPEKNDPGTGLAE-VPVVALSYWVNGEPRWVGDKPKRFLVKPDSLDAFRSLTQGLRLCCLHFHNHSCPQDLEDIR 495
            RG S  +  GGDD+      P  ++ +  TQ    +D+ T      IEDIY   V  G  R+V FLS TMGLTVDISDPMQP                       PASPC  VIL+TSPRYG+LQ FRKEMA RGI+AQMFHTGWKGS LPPRDIRLF+TDSR+ S L WRYK    GR    GG + LGAEDR   VIPLSSLANIG AE Y+  G+  +   L SWL  P S +R         + + K+ D    ++   GL E VPV+ALSYWV G+PRWVGD PKR LV PDSLD+F+ L+ GLRLCCLHFHN+SCPQDLEDIR
Sbjct:  276 RGTSMSSRTGGDDEAGDAVLPEFHQSHDETQEEITIDEPTTPAAADIEDIYADDVTHGESRRVTFLSRTMGLTVDISDPMQPXXXXXXXXXXXXXXXXXXXXXXXPASPCSGVILDTSPRYGTLQAFRKEMASRGINAQMFHTGWKGSFLPPRDIRLFMTDSRKASVLYWRYKTGPFGRRTAAGGNQGLGAEDRR--VIPLSSLANIGPAELYRH-GAPSSRRNLLSWLSIPSSLRRANGDSPVDYRKIQKDKDLDGVDNGKAGLVEAVPVLALSYWVEGKPRWVGDHPKRLLVMPDSLDSFQRLSHGLRLCCLHFHNYSCPQDLEDIR 601          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig9029.19964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G283_ECTSI7.050e-10742.93Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L7W7_9PHAE3.150e-9254.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig9029contigS-firma_M_contig9029:1347..3940 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig9029.19964.1mRNA_S-firma_M_contig9029.19964.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig9029 1347..3940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig9029.19964.1 ID=prot_S-firma_M_contig9029.19964.1|Name=mRNA_S-firma_M_contig9029.19964.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=496bp
STYEGRLSGTTRTFRDPVEVDSINRRRSSPGVSGRMPPGATRTFREPSIR
GLSGTTRTRDNGGADRKPAAATERQASSPPASNHRRASLQRWLSTKAISS
IGKTGQRGGGRIQEGEERSWYHKEQPGFDSPGGGGVLGGDEADPGSSPAT
RKTELPLEEDGTRVIAESNDSLHERQSTTAVQPTPSTVSRGRSSDNIIGG
DDKPLSNRGNIPTQVDDDTGSIEDIYDTPVGDGVPRQVAFLSGTMGLTVD
ISDPMQPQPPDELWQHQTAHDDREQFPASPCRRVILETSPRYGSLQIFRK
EMARRGISAQMFHTGWKGSILPPRDIRLFLTDSRQKSALCWRYKKNTRGR
GGGEELGAEDRLASVIPLSSLANIGIAEPYQQSGSKGAGGRLSSWLPAPL
SWKREGSVQGEKSKTVNKEVDSPEKNDPGTGLAEVPVVALSYWVNGEPRW
VGDKPKRFLVKPDSLDAFRSLTQGLRLCCLHFHNHSCPQDLEDIR*
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