prot_S-firma_M_contig901.19945.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig901.19945.1
Unique Nameprot_S-firma_M_contig901.19945.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length750
Homology
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BLAST of mRNA_S-firma_M_contig901.19945.1 vs. uniprot
Match: D7FGQ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGQ4_ECTSI)

HSP 1 Score: 587 bits (1512), Expect = 1.200e-198
Identity = 362/666 (54.35%), Postives = 411/666 (61.71%), Query Frame = 0 
Query:   73 LLAGGQGRQQKGRQQRETVAACLPEANVLIDLCRKHYALVTRRGPGQRCGGDGGGRASTATATVATIAQILVAAAPCLSEGDKGVILKQLVSMTLDHGCPAALAQALLAALVALADKDPAKVLRVYASRLCFYCDSQSDPSMRDQVAEVGGMIRALEHFTRVLFAGGQSDVCAQFLYADLSSSSVGASPFAPRLSEEELNDLLCGQKSYPHVAQLINGCLVSRLATVRRSAYETLSNVALFAKEHRGTKAFDMLLRLRLRGAEKDPRLVAVLAALAWEVVFVDQELQDERLVGSGAPGSYALLEDLFAESVEVRLVAFHSVGRLLFHTWIP--GSA----------------GKQGADDGTQNEKDXXXXXXVGGGDRGREGSSLFPLGGLSAPASN--PTASDRSITAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRKRLDPRVRAAARSLASGLRSRRRPARHLLARSALLVLDHGLANGSLDGLRERFPSATRPRSRGGGGGWGVGERFGRGIGSPSVMPASSGDRDGNRDDL--GGWGASGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATGLEATRLSKDALQYASAVQFLVAMLSREDQESVTLAMESRLANYFGGDE 716
            LL    GRQ + R+QR+    CLPE ++LID CRKHYALV RRGPG+R       +A TA ATV T+A +L AAA  LS+ DK  ++KQ+VSMTLD GCP ALAQ LLAALVALAD+DPAK+L VY SRLCFYCDSQ+DP+M+DQVAEVGGMIRALEHFTRVLF GGQSD+CAQFLYAD+SS+S+GA+ F+  LSEE+LNDLLCG+K YPHVAQLINGCL SRLA+VRR AYETLSNVALFAK HRG KAFDMLLRLRL GAEKDPRL+AVLAAL WEVVFVDQ LQDERLVGSG PGSY LL+DLFAESVEVRLVAFHSV RLLFH WIP  G A                  +G  +    E+      X        E     P G  S+P  N  P  +++++                                                            +R+R DPRVRAAARSLASGLR+R+R ARHLL RS LLV+DHGLANGSLDGLR RFP                      G+  PS M  SSGD DG+R D   G +GA                                           G    RLSKDALQYASAV FLVAMLSRE Q+SVTL +ESRLA+YF GDE
Sbjct:    5 LLEATTGRQHE-RRQRQIEMPCLPETSILIDQCRKHYALVARRGPGRRGNHRDDAQAFTAAATVTTMAHVLRAAASFLSDNDKEAVMKQIVSMTLDTGCPVALAQELLAALVALADRDPAKILEVYGSRLCFYCDSQTDPNMQDQVAEVGGMIRALEHFTRVLFTGGQSDLCAQFLYADVSSASLGAASFSSNLSEEDLNDLLCGRKDYPHVAQLINGCLASRLASVRRCAYETLSNVALFAKAHRGPKAFDMLLRLRLGGAEKDPRLIAVLAALVWEVVFVDQALQDERLVGSGTPGSYGLLDDLFAESVEVRLVAFHSVSRLLFHAWIPKEGDAVNREPPPPRRQSRRHRSNRGIQEPEGGEEYCDEDNXXXXXXXXXEELRFRPPGRSSSPGYNNVPACAEQAVLRVSLILHETTSVNDN--------------------------------------------KRRRFDPRVRAAARSLASGLRARKRRARHLLERSVLLVVDHGLANGSLDGLRVRFPPXXXXXX--------XXXXXXVGLEPPSAMSVSSGDEDGDRGDTDDGTYGAGSGVAGGRFGATGLDDGGRRRRGRELGGRNLGRGAGG------GQSTARLSKDALQYASAVHFLVAMLSRERQDSVTLTIESRLADYFDGDE 611
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig901.19945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FGQ4_ECTSI1.200e-19854.35Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR31535:SF3coord: 81..666
NoneNo IPR availablePANTHERPTHR31535FAMILY NOT NAMEDcoord: 81..666

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig901contigS-firma_M_contig901:11338..17730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig901.19945.1mRNA_S-firma_M_contig901.19945.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig901 11337..17730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig901.19945.1 ID=prot_S-firma_M_contig901.19945.1|Name=mRNA_S-firma_M_contig901.19945.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=750bp
HTARLSRSCSRVPGLVFVQSTQATKSSIFTRGVRIGCRTNPVSRSCLRRR
RFSPSSLGMMQEEIMLLLLKHQLLAGGQGRQQKGRQQRETVAACLPEANV
LIDLCRKHYALVTRRGPGQRCGGDGGGRASTATATVATIAQILVAAAPCL
SEGDKGVILKQLVSMTLDHGCPAALAQALLAALVALADKDPAKVLRVYAS
RLCFYCDSQSDPSMRDQVAEVGGMIRALEHFTRVLFAGGQSDVCAQFLYA
DLSSSSVGASPFAPRLSEEELNDLLCGQKSYPHVAQLINGCLVSRLATVR
RSAYETLSNVALFAKEHRGTKAFDMLLRLRLRGAEKDPRLVAVLAALAWE
VVFVDQELQDERLVGSGAPGSYALLEDLFAESVEVRLVAFHSVGRLLFHT
WIPGSAGKQGADDGTQNEKDEEEEEEVGGGDRGREGSSLFPLGGLSAPAS
NPTASDRSITAARKKGNDDDDDDDEDDADSSAPPPACAEQALLRLSLILH
ESNPHNNNNNNNNNNNNASRRKRLDPRVRAAARSLASGLRSRRRPARHLL
ARSALLVLDHGLANGSLDGLRERFPSATRPRSRGGGGGWGVGERFGRGIG
SPSVMPASSGDRDGNRDDLGGWGASGGGGGGGGGGDGSAEGADADGGDDG
GEIGGRSGTGSGGGDATGLEATRLSKDALQYASAVQFLVAMLSREDQESV
TLAMESRLANYFGGDEFWGDGGGGGGGGGGSDDDDGEDGDWPMADANDGW
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