prot_S-firma_M_contig8971.19877.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8971.19877.1
Unique Nameprot_S-firma_M_contig8971.19877.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length183
Homology
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BLAST of mRNA_S-firma_M_contig8971.19877.1 vs. uniprot
Match: A0A6H5KHE5_9PHAE (Kinesin motor domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHE5_9PHAE)

HSP 1 Score: 185 bits (470), Expect = 5.600e-51
Identity = 103/126 (81.75%), Postives = 116/126 (92.06%), Query Frame = 0 
Query:   27 EGAVMPEGTVAAEEMDKLDCGALESAGASEAAIALVMEREGRWRERDAKLIAEQWRSLQRAQQLAVEKEISARQLAANRQNCEHLAQDLQESVDRRMEMEQDRAAEAQGDT-DLERPKKEKIMLQQ 151
            EG    EGTVAAEEM+KLDC ALESAGASEAAI+LV+ERE RWRERDA+LIAEQWRS+QRAQQL V+KE+SARQLAAN+QNCEHL QDL+ESV+RRMEMEQ++AAEAQGD  DL+RPKKEKIMLQQ
Sbjct:  722 EGXAAVEGTVAAEEMEKLDCLALESAGASEAAISLVLEREERWRERDARLIAEQWRSMQRAQQLLVQKEVSARQLAANQQNCEHLQQDLEESVERRMEMEQNKAAEAQGDAADLDRPKKEKIMLQQ 847
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8971.19877.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHE5_9PHAE5.600e-5181.75Kinesin motor domain-containing protein n=2 Tax=Ec... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8971contigS-firma_M_contig8971:1258..3647 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8971.19877.1mRNA_S-firma_M_contig8971.19877.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8971 350..4075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8971.19877.1 ID=prot_S-firma_M_contig8971.19877.1|Name=mRNA_S-firma_M_contig8971.19877.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=183bp
MASSAAASATASKAASAAGGAAAASAEGAVMPEGTVAAEEMDKLDCGALE
SAGASEAAIALVMEREGRWRERDAKLIAEQWRSLQRAQQLAVEKEISARQ
LAANRQNCEHLAQDLQESVDRRMEMEQDRAAEAQGDTDLERPKKEKIMLQ
QVGHLGVNYLLFWFAIRRLQIDSKPHIIHTYT*
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