prot_S-firma_M_contig897.19874.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig897.19874.1
Unique Nameprot_S-firma_M_contig897.19874.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length187
Homology
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: D8LB85_ECTSI (Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB85_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 9.210e-114
Identity = 163/186 (87.63%), Postives = 175/186 (94.09%), Query Frame = 0
Query:    1 MEDVGSSKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGSANGAGGGKLSK 186
            MED GSSKLDV+ AK+RRTYQYWLDRSVI+T WRW  FFVSV LFLLR+Y+VKGWFIVTYGLGIFLLNNLIGFLSPQIDPE+EGPGLPT+GSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFF++FDIPVFWPILL+YFIVLMFLTMKRQVKHMIKHKYVPWNWGKA YKG G++NG GGGK  K
Sbjct:    1 MEDPGSSKLDVYSAKIRRTYQYWLDRSVIYTMWRWGLFFVSVCLFLLRIYLVKGWFIVTYGLGIFLLNNLIGFLSPQIDPESEGPGLPTSGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFSLFDIPVFWPILLIYFIVLMFLTMKRQVKHMIKHKYVPWNWGKATYKG-GASNGTGGGKPFK 185          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A7R9YCX7_9STRA (Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YCX7_9STRA)

HSP 1 Score: 229 bits (584), Expect = 6.770e-74
Identity = 115/171 (67.25%), Postives = 142/171 (83.04%), Query Frame = 0
Query:    7 SKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAE---GPGLPTTGSD--EFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 172
            SKL+VF AKL RTYQ++LD+S I+T  RW+ FF  + L+LLR+Y+V G+F+VTY LGIFLLNNLIGFL+PQ+DPEA+   G GLPTT +D  EFRPF RRLPEFQFW S  KGL+  F MTFF++FD+PVFWPILL+YFIVL  LTMKRQ++HMIK+KYVP++WGK K+ G
Sbjct:    9 SKLEVFQAKLSRTYQHYLDKSAIYTAPRWLSFFGILALYLLRIYVVNGFFLVTYALGIFLLNNLIGFLTPQLDPEADRGDGLGLPTTNNDVDEFRPFERRLPEFQFWYSCIKGLVYCFMMTFFSVFDVPVFWPILLIYFIVLFSLTMKRQIQHMIKYKYVPFSWGKPKHTG 179          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A7S3K339_9STRA (Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K339_9STRA)

HSP 1 Score: 228 bits (582), Expect = 2.170e-73
Identity = 116/184 (63.04%), Postives = 145/184 (78.80%), Query Frame = 0
Query:    7 SKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSD-EFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGSANGA---GGGKLSK 186
            S ++ FL K++R +Q  LD S ++   RW+ FFV ++++++R   + GW+IVTYGLGIFLLNN IGFLSPQ+DPE EGP LPT+  D EFRPFSRR+PEF+FW SS KG+L+AF MTFF+ FDIPVFWPILL+Y+I L+FLTMKRQ+KHMIKHKYVPW++GKAKY   G A G     G KLSK
Sbjct:   17 SGIEKFLVKIQRQFQRILDISTVYVITRWLIFFVCILIYVIRTASINGWYIVTYGLGIFLLNNFIGFLSPQMDPENEGPVLPTSSDDAEFRPFSRRVPEFKFWYSSTKGVLIAFVMTFFSFFDIPVFWPILLLYWIALVFLTMKRQIKHMIKHKYVPWSYGKAKYAAPGGAGGTRTLSGIKLSK 200          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A7S2W0T1_9STRA (Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W0T1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.690e-72
Identity = 110/170 (64.71%), Postives = 132/170 (77.65%), Query Frame = 0
Query:    7 SKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGSA 176
            SK +VF ++LR T Q WLD S  + T RW+ F V + L++LRVY+V GWFI+TYGLGI LLNN IGFLSPQ+DPE+EG  LPT  SDE RPF RRLPEF+FWL+S + + ++F MTFF IFDIPVFWPILL+YF  L F TMKRQ+ HMIKHKYVPW WGK +Y G  +A
Sbjct:   14 SKFEVFQSQLRITTQQWLDWSTPYVTARWIFFVVLLSLYMLRVYLVNGWFIITYGLGIHLLNNFIGFLSPQMDPESEGATLPTFESDEPRPFRRRLPEFKFWLASARAVCLSFFMTFFQIFDIPVFWPILLLYFFALFFFTMKRQIMHMIKHKYVPWTWGKRRYTGKSAA 183          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA)

HSP 1 Score: 238 bits (607), Expect = 3.040e-72
Identity = 121/207 (58.45%), Postives = 145/207 (70.05%), Query Frame = 0
Query:    8 KLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSRRLPEFQFWLSSQK------------------------------------------GLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 172
            KL+   A++ RTYQ+WLDRSVI+ T RWVGF V + ++LLRVY+++GWFIVTYGLGIFLLNN IGFLSPQ+DPE +GPGLPT  +DEFRPF+RRLPEFQFW SS +                                          G+L A  MT F++FD+PVFWPILLVYF+VL FLTMKRQ+KHMIKH+YVPWNWGKAKY+G
Sbjct:   12 KLEQLRAQVSRTYQHWLDRSVIYHTGRWVGFGVLLGVYLLRVYIIQGWFIVTYGLGIFLLNNFIGFLSPQVDPEMDGPGLPTASTDEFRPFTRRLPEFQFWHSSTRDAAXXXXXXXXXXXXXXXXXXXSFRXXXXXXXXXXXXXXXXRGVLTALVMTHFSLFDVPVFWPILLVYFVVLFFLTMKRQIKHMIKHRYVPWNWGKAKYRG 218          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A7S2FFP1_9STRA (Protein RER1 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FFP1_9STRA)

HSP 1 Score: 213 bits (543), Expect = 9.820e-68
Identity = 103/176 (58.52%), Postives = 131/176 (74.43%), Query Frame = 0
Query:    1 MEDVGSSKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGSA 176
            M+    S +  F AK    +Q  LDRS      RW+ F   + ++ LRVY+V GW+I+TYGLGI+LLNNLIGFLSPQ+DP++EGP LPT  S+EFRPFSRRLPEF+FW +S + + ++F +TFF IFDIPVFWPILL+YFI L  LTMKRQ+KHM+KH YVPW  GK ++ G G+A
Sbjct:    1 MQQEPPSSISGFNAKFNSQFQMLLDRSTPHIVGRWIAFVFLMGIYTLRVYLVNGWYIITYGLGIYLLNNLIGFLSPQVDPDSEGPCLPTRDSEEFRPFSRRLPEFKFWYASARAVCVSFFLTFFQIFDIPVFWPILLLYFIALFILTMKRQIKHMMKHNYVPWASGKKRFTGGGAA 176          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A7S2V4J3_9STRA (Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V4J3_9STRA)

HSP 1 Score: 211 bits (536), Expect = 9.660e-67
Identity = 104/168 (61.90%), Postives = 129/168 (76.79%), Query Frame = 0
Query:   12 FLAKLR----RTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGS 175
            F  KLR    R YQ++LD+S I T  RW  F + + ++ LRVY+V GW+IVTYGLGIFLLNN IGFLSPQ+DP+++GP LP+  SDEFRPF+RRLPEFQFW +  + +++AF MTFF +FDIPVFWPILL YF VL  LTMKRQ+KHMI H YVPWN GK +++   S
Sbjct:    8 FFEKLRFTLSRRYQHFLDKSTIHTVPRWGFFILCLGIYALRVYLVNGWYIVTYGLGIFLLNNFIGFLSPQVDPDSDGPVLPSKDSDEFRPFTRRLPEFQFWHACTRAVIIAFFMTFFKVFDIPVFWPILLFYFFVLFVLTMKRQIKHMITHGYVPWNRGKQRFQSKNS 175          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A1E7FRY9_9STRA (Protein RER1 n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FRY9_9STRA)

HSP 1 Score: 210 bits (534), Expect = 3.730e-66
Identity = 104/184 (56.52%), Postives = 134/184 (72.83%), Query Frame = 0
Query:    5 GSSKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSD--EFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGSANGAGGGKLSK 186
            GS   D   A  +R  QYW+D+S I    RW  F   +++F LR+Y+++G+FIV YGLGIFLLNN I FLSP  DP   GPGLP+T S+  E+RPF+RRLPEF+FW++  +G + +  MTFF++FDIPVFWPILL+YF VL F+TMKRQ+ HM KHKYVP +WGK+KYK +G  N   GG +SK
Sbjct:   11 GSQSFDQHSANFKRMTQYWMDKSTIHVVPRWCLFAFLLLMFFLRIYLIQGYFIVAYGLGIFLLNNFIAFLSPLEDPTDNGPGLPSTESEGKEYRPFTRRLPEFKFWMACTRGTITSIFMTFFSVFDIPVFWPILLMYFFVLFFMTMKRQILHMYKHKYVPISWGKSKYKDAGVENNMFGGGMSK 194          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A7S2V805_9STRA (Protein RER1 n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2V805_9STRA)

HSP 1 Score: 209 bits (533), Expect = 1.040e-65
Identity = 106/174 (60.92%), Postives = 131/174 (75.29%), Query Frame = 0
Query:   16 LRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEA---EGPGLPTTGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKGSGSANGAGGGKLSK 186
            ++R +QYWLD+S I    RW+GF V + LF LRVY+V+G+FIV YGLGIFLLNN I FLSP  +P     +G  LPT  + EFRPF+RRLPEF+FWL+  +G L    MTFF+IFD+PVFWPILL+YF VL F+TMKRQ+ HM KHKYVP +WGKAKYK +G   GA GG ++K
Sbjct:   42 VKRAFQYWLDKSTIHVVPRWIGFSVVLALFFLRVYLVQGFFIVAYGLGIFLLNNFIAFLSPLEEPGRPADDGLALPTNQAQEFRPFARRLPEFKFWLACTRGALTCIVMTFFSIFDVPVFWPILLLYFFVLFFMTMKRQIIHMYKHKYVPISWGKAKYKDAGVEQGAFGGGMAK 215          
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Match: A0A2R6X9H8_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X9H8_MARPO)

HSP 1 Score: 209 bits (531), Expect = 2.020e-65
Identity = 99/157 (63.06%), Postives = 128/157 (81.53%), Query Frame = 0
Query:   16 LRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVYMVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSRRLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKRQVKHMIKHKYVPWNWGKAKYKG 172
            + R +QY+LD+S      RW+G  V+  L+ LRVY VKG++IVTYGLGI++LN LIGFLSPQ+DPE+EGP LPT GSDEF+PF RRLPEF+FW +  K  ++AF +TFF+IFD+PVFWPILL+Y+IVL  LTMKRQ+KHMIK+KY+P++ GK +Y G
Sbjct:   24 MSRKFQYYLDKSTPHPVARWIGSLVAAALYCLRVYYVKGFYIVTYGLGIYILNLLIGFLSPQVDPESEGPALPTRGSDEFKPFIRRLPEFKFWYALTKAFVVAFCLTFFSIFDVPVFWPILLLYWIVLFVLTMKRQIKHMIKYKYIPFSLGKTRYSG 180          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig897.19874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LB85_ECTSI9.210e-11487.63Protein RER1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A7R9YCX7_9STRA6.770e-7467.25Protein RER1 n=1 Tax=Pinguiococcus pyrenoidosus Ta... [more]
A0A7S3K339_9STRA2.170e-7363.04Protein RER1 n=1 Tax=Aureoumbra lagunensis TaxID=4... [more]
A0A7S2W0T1_9STRA1.690e-7264.71Protein RER1 n=1 Tax=Rhizochromulina marina TaxID=... [more]
A0A835YJT4_9STRA3.040e-7258.45Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A7S2FFP1_9STRA9.820e-6858.52Protein RER1 n=1 Tax=Dictyocha speculum TaxID=3568... [more]
A0A7S2V4J3_9STRA9.660e-6761.90Protein RER1 n=1 Tax=Fibrocapsa japonica TaxID=946... [more]
A0A1E7FRY9_9STRA3.730e-6656.52Protein RER1 n=1 Tax=Fragilariopsis cylindrus CCMP... [more]
A0A7S2V805_9STRA1.040e-6560.92Protein RER1 n=1 Tax=Amphiprora paludosa TaxID=265... [more]
A0A2R6X9H8_MARPO2.020e-6563.06Uncharacterized protein n=2 Tax=Marchantia polymor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004932Retrieval of early ER protein Rer1PFAMPF03248Rer1coord: 14..171
e-value: 4.8E-66
score: 221.7
IPR004932Retrieval of early ER protein Rer1PIRSFPIRSF016013AtER_Rer1pcoord: 1..180
e-value: 6.0E-73
score: 242.5
IPR004932Retrieval of early ER protein Rer1PANTHERPTHR10743PROTEIN RER1coord: 12..172
NoneNo IPR availablePANTHERPTHR10743:SF0PROTEIN RER1coord: 12..172
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 75..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 54..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 115..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 54..76
NoneNo IPR availableTMHMMTMhelixcoord: 30..47
NoneNo IPR availableTMHMMTMhelixcoord: 124..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig897contigS-firma_M_contig897:15156..19144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig897.19874.1mRNA_S-firma_M_contig897.19874.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig897 14021..19144 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig897.19874.1 ID=prot_S-firma_M_contig897.19874.1|Name=mRNA_S-firma_M_contig897.19874.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=187bp
MEDVGSSKLDVFLAKLRRTYQYWLDRSVIFTTWRWVGFFVSVVLFLLRVY
MVKGWFIVTYGLGIFLLNNLIGFLSPQIDPEAEGPGLPTTGSDEFRPFSR
RLPEFQFWLSSQKGLLMAFGMTFFNIFDIPVFWPILLVYFIVLMFLTMKR
QVKHMIKHKYVPWNWGKAKYKGSGSANGAGGGKLSK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004932Rer1