prot_S-firma_M_contig897.19870.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig897.19870.1
Unique Nameprot_S-firma_M_contig897.19870.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length173
Homology
BLAST of mRNA_S-firma_M_contig897.19870.1 vs. uniprot
Match: A0A6H5K9N2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9N2_9PHAE)

HSP 1 Score: 220 bits (561), Expect = 6.410e-71
Identity = 124/175 (70.86%), Postives = 139/175 (79.43%), Query Frame = 0
Query:    1 MSSVLEAMKGPIGVAFLTMVTVLLVVGGVALCRKLCCKPTVNYTAVNHGLDEEEIAFKNSLEAQN-GGDDIDELFNFSGQDELEFDTNDLDNIEMLQRYRTNLGAPPSPR--ETGLGKESSASTNGGVGNSERSSSGRGGALADTVQEAEDLEALLMGGAGNGGMMNGQGTIGPA 172
            M+ V+EAM+GPIGVAFLTMVTVL+VVGGVA+CR+LCCK  VNYTAVNH LDEEE AFKNSLEAQN GGDDIDELFNFSGQDELEFDTNDLDN+EM+Q YR+NLG P +PR  ETGLGK+ +A+ NG         SGR GA  +TVQEAEDLEALLMGG      +N  G   PA
Sbjct:    1 MAGVIEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLCCKTAVNYTAVNHSLDEEETAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMMQMYRSNLGVPANPRGVETGLGKDGAAAING---------SGREGAGRNTVQEAEDLEALLMGGGAGSNGINLSGGPSPA 166          
BLAST of mRNA_S-firma_M_contig897.19870.1 vs. uniprot
Match: D8LB60_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB60_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 3.990e-58
Identity = 99/123 (80.49%), Postives = 110/123 (89.43%), Query Frame = 0
Query:    1 MSSVLEAMKGPIGVAFLTMVTVLLVVGGVALCRKLCCKPTVNYTAVNHGLDEEEIAFKNSLEAQN-GGDDIDELFNFSGQDELEFDTNDLDNIEMLQRYRTNLGAPPSPR---ETGLGKESSA 119
            M+ V+EAM+GPIGVAFLTMVTVL+VVGGVA+CR+L CK  VNYTAVNH LDEEEIAFKNSLEAQN GGDDIDELFNFSGQDELEFDTNDLDN+EMLQ YR+NLG P +PR   ETGLGK+ +A
Sbjct:    1 MAGVMEAMQGPIGVAFLTMVTVLVVVGGVAVCRRLLCKTAVNYTAVNHSLDEEEIAFKNSLEAQNEGGDDIDELFNFSGQDELEFDTNDLDNLEMLQMYRSNLGFPANPRGGVETGLGKDGAA 123          
BLAST of mRNA_S-firma_M_contig897.19870.1 vs. uniprot
Match: A0A7S2V8A7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8A7_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 1.470e-14
Identity = 40/82 (48.78%), Postives = 55/82 (67.07%), Query Frame = 0
Query:   23 LLVVGGVALCRKLCCKPTVNYTAVNHGLDEEEIAFKNSLEAQNGGDDIDELFNFSGQDELEFDTNDLDNIEMLQRYRTNLGA 104
            L++  G+  C K   +  V Y AV H LD++E+ FK +LE + G D ID+LF+F GQD++EFD  DLDN+E L+ YR NL A
Sbjct:   22 LIIFFGIRRCNKCKRRSQVPYNAVAHELDDDELLFKKTLEMK-GDDVIDKLFDFDGQDDMEFDAKDLDNLESLESYRKNLVA 102          
BLAST of mRNA_S-firma_M_contig897.19870.1 vs. uniprot
Match: A0A7S2RGQ9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGQ9_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 4.190e-12
Identity = 39/72 (54.17%), Postives = 51/72 (70.83%), Query Frame = 0
Query:   38 KPTVNYTAVNHGLDEEEIAFKNSLEAQNGGDDIDELFNFS--GQDELEFDTNDLDNIEMLQRYRTNLGAPPS 107
            K    YT V+HGLD+EE AFK +LE Q   D+ID+LFNF+  G  E+EFD ++L+ IEML+ YR+NL A  S
Sbjct:   82 KKDYRYTMVHHGLDDEEQAFKRNLETQT--DEIDDLFNFTADGDQEIEFDASELEQIEMLENYRSNLVAASS 151          
BLAST of mRNA_S-firma_M_contig897.19870.1 vs. uniprot
Match: A0A836C8T1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8T1_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.840e-11
Identity = 36/70 (51.43%), Postives = 47/70 (67.14%), Query Frame = 0
Query:   42 NYTAVNHGLDEEEIAFKNSLEAQNGGDDIDELFNFSGQDELEFDTNDLDNIEMLQRYRTNL---GAPPSP 108
            +Y AVNHGLD+EE+ FK  ++  +  ++IDELFNFS  D+L FD  +L  IEML  YR +L   GA P P
Sbjct:   41 SYQAVNHGLDDEELQFKKRMDEMHA-EEIDELFNFSPDDDLAFDAEELGQIEMLDAYRKDLLEEGASPPP 109          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig897.19870.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K9N2_9PHAE6.410e-7170.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LB60_ECTSI3.990e-5880.49Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2V8A7_9STRA1.470e-1448.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RGQ9_9STRA4.190e-1254.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C8T1_9STRA3.840e-1151.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..172
NoneNo IPR availableTMHMMTMhelixcoord: 10..32

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig897contigS-firma_M_contig897:1001..2522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig897.19870.1mRNA_S-firma_M_contig897.19870.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig897 81..2577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig897.19870.1 ID=prot_S-firma_M_contig897.19870.1|Name=mRNA_S-firma_M_contig897.19870.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=173bp
MSSVLEAMKGPIGVAFLTMVTVLLVVGGVALCRKLCCKPTVNYTAVNHGL
DEEEIAFKNSLEAQNGGDDIDELFNFSGQDELEFDTNDLDNIEMLQRYRT
NLGAPPSPRETGLGKESSASTNGGVGNSERSSSGRGGALADTVQEAEDLE
ALLMGGAGNGGMMNGQGTIGPA*
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