prot_S-firma_M_contig8964.19865.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8964.19865.1
Unique Nameprot_S-firma_M_contig8964.19865.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length173
Homology
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BLAST of mRNA_S-firma_M_contig8964.19865.1 vs. uniprot
Match: D8LE96_ECTSI (Ubiquitin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LE96_ECTSI)

HSP 1 Score: 151 bits (382), Expect = 3.030e-39
Identity = 80/123 (65.04%), Postives = 85/123 (69.11%), Query Frame = 0 
Query:   50 EVRGAGGLDGRR---KGPLSNKWCEFNDTVVKEWEVEGRRRGGEAGESAGGXXXXXXGSRLGGLEMDCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQSYGAEEDRRSDPDSSAGG 169
            E  GAGG+ G     KGP   +WCEFNDT+VKEW V GRR G E GE          G R+GGL  DCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQSYGA  D  S  +   GG
Sbjct: 2807 EAEGAGGVGGADVDGKGPP--QWCEFNDTMVKEWAVAGRRAGSEGGERG----KEDGGGRIGGLSTDCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVDQSYGAGADTASPEEEGEGG 2923
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8964.19865.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE96_ECTSI3.030e-3965.04Ubiquitin domain-containing protein n=2 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8964contigS-firma_M_contig8964:1914..3926 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8964.19865.1mRNA_S-firma_M_contig8964.19865.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8964 1914..3926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8964.19865.1 ID=prot_S-firma_M_contig8964.19865.1|Name=mRNA_S-firma_M_contig8964.19865.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=173bp
ATAAEASSAAAASAHEEGTAPTAAASPLSPTAAERCSSEAAGKAVAAAAE
VRGAGGLDGRRKGPLSNKWCEFNDTVVKEWEVEGRRRGGEAGESAGGGGG
SGSGSRLGGLEMDCFGGQQTMQETDEYGWPRTLRKDNIQNAYLLFYERVD
QSYGAEEDRRSDPDSSAGGRDAD
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