prot_S-firma_M_contig8955.19858.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8955.19858.1
Unique Nameprot_S-firma_M_contig8955.19858.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length438
Homology
BLAST of mRNA_S-firma_M_contig8955.19858.1 vs. uniprot
Match: A0A6H5K2V5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V5_9PHAE)

HSP 1 Score: 359 bits (921), Expect = 6.440e-114
Identity = 253/354 (71.47%), Postives = 262/354 (74.01%), Query Frame = 0
Query:    1 MGLGLRNHSLTNLANMVRSQSVSSFHSDIFAAGSSAARSTVAESPAWGSYPANLDKMGGGAXXXXXXXAGDAFTTSPS--MGPRGPGRGMAAMRPLAGXXXXXXXXXXXA----DLSPPQFAGRGTAARREVADRGLAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVPPSGPG-GGAPTSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPL-GAPLLEEDPLDLELXXXXXXXXXXXXXXXXXXXADTFGAPSSFLTSHGRRGLLDGGGSAGDAAGMEVRLPRHASYPSLTVSRGGXXXXXXXXXXXXXXXYGMEDLVHGALEHLTAGDSATGGA 346
            MGLGLRNHSLTNLANMVRSQSVSSFHS+IFA+G     S   ESPAWGSYPANLDKMG G XXXXXXX  D FT SPS  +GPRG GRG   MRP  G           A    DLSP QFAGRGTAARREV DRG++   XXXXXXXXXXXXXXXXX                G+ PSGPG  GA   GRAMVHNRSDTDLVASFSR GFGQGGVSRWSPLMSPTASPL GAPLLEEDPLDLEL                   ADTFG PSSFLTSHGRRGL+DG G+AG+A  MEVRLPRHASYPSLTVSRGG  XXXXXXXXXXXX YGMEDLVHGALEHLTAGDSATGGA
Sbjct:  105 MGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVGSAAVESPAWGSYPANLDKMGSGXXXXXXXXXEDIFTLSPSPSVGPRGAGRGALPMRPPTGGGDSDVVGGTGAGAGADLSPQQFAGRGTAARREVVDRGMSAXXXXXXXXXXXXXXXXXXXMGGGSSFDPR------GIVPSGPGRSGALPGGRAMVHNRSDTDLVASFSRFGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEENASRGAGASGGAGGAA-ADTFGPPSSFLTSHGRRGLMDGQGAAGEAPSMEVRLPRHASYPSLTVSRGGGSXXXXXXXXXXXXGYGMEDLVHGALEHLTAGDSATGGA 451          
BLAST of mRNA_S-firma_M_contig8955.19858.1 vs. uniprot
Match: D8LNL2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL2_ECTSI)

HSP 1 Score: 294 bits (753), Expect = 3.180e-92
Identity = 200/307 (65.15%), Postives = 210/307 (68.40%), Query Frame = 0
Query:    1 MGLGLRNHSLTNLANMVRSQSVSSFHSDIFAAGSSAARSTVAESPAWGSYPANLDKMGGGAXXXXXXXAG-DAFTTSPSMGPRGPGRGMAAMRPLAGXXXXXXXXXXX--------------ADLSPPQFAGRGTAARREVADRGLAGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVPPSGPG-GGAPTSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPL-GAPLLEEDPLDLELXXXXXXXXXXXXXXXXXXXADTFGAPSSFLTSHGRRGLLDGGGSAGDAAGMEV 290
            MGLGLRNHSLTNLANMVRSQSVSSFHS+IFA+G    RST  +SPAWGSYPANLDKMG G XXXXXXX   D FT SPSMGPRG GRG   MRP  G       XXXX              ADLSP QFAGRGTAARREV DRG++  S                                 G+ PSGPG  GAP SGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPL GAPLLEEDPLDLEL      XXXXXXX       DTFGAPSSFLTSHGRRGL+DG G++G+A GMEV
Sbjct:  108 MGLGLRNHSLTNLANMVRSQSVSSFHSEIFASGGKPVRSTAIDSPAWGSYPANLDKMGSGXXXXXXXXXXEDMFTVSPSMGPRGAGRGTLPMRPPTGGGDRGGVXXXXXXXXXDVXXXXXXGADLSPQQFAGRGTAARREVVDRGMSAGSAAGSTRTSQRRPMGGGSSFDPR-----------GMVPSGPGRSGAPPSGRAMVHNRSDTDLVASFSRLGFGQGGVSRWSPLMSPTASPLVGAPLLEEDPLDLELEENASRXXXXXXXGAA---VDTFGAPSSFLTSHGRRGLMDGHGASGEAPGMEV 400          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8955.19858.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K2V5_9PHAE6.440e-11471.47Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
D8LNL2_ECTSI3.180e-9265.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8955contigS-firma_M_contig8955:2583..4399 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8955.19858.1mRNA_S-firma_M_contig8955.19858.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8955 2583..4426 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8955.19858.1 ID=prot_S-firma_M_contig8955.19858.1|Name=mRNA_S-firma_M_contig8955.19858.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=438bp
MGLGLRNHSLTNLANMVRSQSVSSFHSDIFAAGSSAARSTVAESPAWGSY
PANLDKMGGGAGGGGGGAAGDAFTTSPSMGPRGPGRGMAAMRPLAGGGGG
GGGDGGGADLSPPQFAGRGTAARREVADRGLAGSSAAAAARASQSQRRPM
GGGGGGGGGSSFEHNHRGGVPPSGPGGGAPTSGRAMVHNRSDTDLVASFS
RLGFGQGGVSRWSPLMSPTASPLGAPLLEEDPLDLELEENSNSRAGGGGG
GGGGGGADTFGAPSSFLTSHGRRGLLDGGGSAGDAAGMEVRLPRHASYPS
LTVSRGGGGGGAGGAGAGGGGGYGMEDLVHGALEHLTAGDSATGGAAPAG
GEGVGVGGGGGGGLTSAGMSSGSLSGSTSGRVNSSGDRVPAATVQSSGGA
AGSASTALIPSGSRGGNGGGGGGGGGGYTSSPGHSPAS
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