prot_S-firma_M_contig8955.19857.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8955.19857.1
Unique Nameprot_S-firma_M_contig8955.19857.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length308
Homology
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A6H5K311_9PHAE (PSP1 C-terminal domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K311_9PHAE)

HSP 1 Score: 223 bits (569), Expect = 1.250e-68
Identity = 123/160 (76.88%), Postives = 130/160 (81.25%), Query Frame = 0
Query:  149 MQQGGFGRRDQRMGPRGDMGGGEYGMAGPMGGGVGVGPRLGPGSGPQMVRAGGXXXXGMYEVVEQDLGDGNVYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQYEKEHIIRAATEDEVSMRKTRL 308
            MQQGG+GRRDQRMGPRGD+GGGEYGM GPM                       XXXX MY++VE DLGDGNVYHVQFKRSARNFLL KTCQRD+QVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQ+EKEHIIRAATEDEV M K +L
Sbjct:    1 MQQGGYGRRDQRMGPRGDIGGGEYGMGGPM---------XXXXXXXXXXXXXXXXXXXMYDMVE-DLGDGNVYHVQFKRSARNFLLAKTCQRDIQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQFEKEHIIRAATEDEVQMVKDKL 150          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A835ZJM0_9STRA (PSP1 C-terminal conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJM0_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.060e-23
Identity = 56/113 (49.56%), Postives = 74/113 (65.49%), Query Frame = 0
Query:  207 MYEVVEQDLGDGNVYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPL-PATAGQKRGFGQY----------EKEHIIRAATEDEVSMRKTRL 308
            MY++ E D GDGN Y V+FKR  R FLL ++C+R L +GDYVKVEADRGEDLG+VV I P+PEAG  L P TAG                  E+E I+R AT++E+++ K ++
Sbjct:    1 MYDIAE-DPGDGNAYTVRFKRGTRAFLLARSCERSLTIGDYVKVEADRGEDLGVVVAIAPLPEAGAALRPPTAGHAGRXXXXXXXXXXXXGCERERILRGATDEEIAVLKEKM 112          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A836CPR8_9STRA (PSP1 C-terminal conserved region-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPR8_9STRA)

HSP 1 Score: 104 bits (259), Expect = 1.240e-23
Identity = 50/95 (52.63%), Postives = 69/95 (72.63%), Query Frame = 0
Query:  220 VYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAG-RPLPATAGQKR-----GFGQYEKEHIIRAATEDEVSMRKTRL 308
            +Y VQFKR AR FLL + C+R L +GDYVKVEADRGEDLG++V I P+P+AG  P P TAG ++       GQ E+E I+R A++DE+++ K ++
Sbjct:    1 MYTVQFKRGARTFLLARACERSLTIGDYVKVEADRGEDLGVIVAIAPLPDAGVAPKPPTAGHRQRGGGGALGQCERERILRGASDDEIALLKEKM 95          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A6H5K2V5_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2V5_9PHAE)

HSP 1 Score: 92.0 bits (227), Expect = 5.080e-17
Identity = 76/124 (61.29%), Postives = 82/124 (66.13%), Query Frame = 0
Query:    1 MMRDGRFVPAAAMGGDG-GGHPGMMYGEGXXXXXXYGGXXXXXXXXXXXXX------MMDIPWGGQDPVALYQALLMKQSLAAAHASGM----NMNMRFPNXXXXXXXXXXXXXXXXMVDMAAL 113
            MMRDGRFVP+    GDG GGHPGMMYG+       YGG XXXXXXXXXXXX      MMD+PWGGQDPVA+YQALLMKQSLAAAHASGM    NM+M   N                MVD+AAL
Sbjct:  587 MMRDGRFVPS----GDGSGGHPGMMYGD----VGGYGGGXXXXXXXXXXXXXXXXXGMMDVPWGGQDPVAVYQALLMKQSLAAAHASGMRFPPNMHMAAGNGMGMN-----------MVDVAAL 691          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A7S2XWC2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWC2_9STRA)

HSP 1 Score: 80.5 bits (197), Expect = 3.300e-13
Identity = 43/88 (48.86%), Postives = 55/88 (62.50%), Query Frame = 0
Query:  216 GDGNVYHVQFKRSARNFLLGKTC-QRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQYEKEHIIRAATEDEVS 302
            GDG +Y VQFKR  R+FL   T   + +  GDYV+VEADRG DLG V+   P   +  P P TAG    +G  +KE ++RAATE E+S
Sbjct:  364 GDGFLYQVQFKRCVRSFLGSPTLTNQPVMPGDYVRVEADRGHDLGKVIAKAPFMGSNPPTPVTAGHNLRYG-LDKEKVLRAATEQEIS 450          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A7S2RAB1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAB1_9STRA)

HSP 1 Score: 77.8 bits (190), Expect = 3.240e-12
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = 0
Query:  217 DGNVYHVQFKRSARNFLL--GKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQK-RGFGQY--EKEHIIRAATEDE 300
            DG+VY V+FKR+ RNFLL  G +C+  +  G  V VEADRGEDLG+VV+  P+ +       TAG K RGFG    + + ++R ATE+E
Sbjct:  493 DGSVYQVKFKRNQRNFLLSGGNSCRGSVTTGSIVVVEADRGEDLGVVVSKMPLEQFVEESATTAGHKPRGFGSMFQDTKRVLRLATEEE 581          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: A0A7S3DVM7_9STRA (Hypothetical protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DVM7_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 1.050e-11
Identity = 44/94 (46.81%), Postives = 56/94 (59.57%), Query Frame = 0
Query:  220 VYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPE----------AGRPLPATAGQKRGFGQYEKEHIIRAATEDEVSM 303
            VY+V+FKR+ RNF+LG    RDL++G YVKVEADRGEDLG+V+   P  +          AG   P   G   G    + + IIR AT DEVS+
Sbjct:  593 VYNVKFKRTQRNFVLGPRITRDLKIGTYVKVEADRGEDLGIVIGKVPADKFNFASRTQYTAGMGPPGGMG---GSSAADLKRIIRLATHDEVSL 683          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: B5Y510_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y510_PHATC)

HSP 1 Score: 75.9 bits (185), Expect = 1.430e-11
Identity = 44/95 (46.32%), Postives = 56/95 (58.95%), Query Frame = 0
Query:  220 VYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAG-----------RPLPATAGQKRGFGQYEKEHIIRAATEDEVSM 303
            VY+V+FKRS RNF+LG    RDL++G YVKVEADRGEDLG+VV + P                 P P++ G        + + IIR AT DEVS+
Sbjct:  625 VYNVKFKRSQRNFVLGPRISRDLKIGTYVKVEADRGEDLGIVVGMVPAERYSFSSRSSFSSGVGPAPSSIGSSN---IADLKCIIRLATHDEVSL 716          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: B8BVJ8_THAPS (PSP1 C-terminal domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVJ8_THAPS)

HSP 1 Score: 72.0 bits (175), Expect = 7.840e-11
Identity = 39/93 (41.94%), Postives = 58/93 (62.37%), Query Frame = 0
Query:  220 VYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQY---------EKEHIIRAATEDEVSM 303
            VY+V+FKRS RNF+LG+   RD+++G YVKVEADRGEDLG+V +I  + +      + +    G G+          + + I+R AT DE+S+
Sbjct:  109 VYNVKFKRSQRNFILGQRITRDVKLGCYVKVEADRGEDLGIVFSIVSMEKYLASNRSKSDNDTGSGEGPDQPAVSAGDLKRIMRVATNDEISL 201          
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Match: K0R8W3_THAOC (PSP1 C-terminal domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R8W3_THAOC)

HSP 1 Score: 70.9 bits (172), Expect = 6.530e-10
Identity = 40/100 (40.00%), Postives = 59/100 (59.00%), Query Frame = 0
Query:  220 VYHVQFKRSARNFLLGKTCQRDLQVGDYVKVEADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQY----------------EKEHIIRAATEDEVSM 303
            VY+V+FKRS RNF+LG    R++++G YVKVEADRGEDLG+V+++  +    + L +T  + R   +                 + + IIR AT DEVS+
Sbjct:  661 VYNVKFKRSQRNFILGPRISREVKIGCYVKVEADRGEDLGIVMSVLSLE---KHLESTTSRHRSSTEDSAASDFSAPSYSTNIGDMKRIIRVATHDEVSL 757          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8955.19857.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A6H5K311_9PHAE1.250e-6876.88PSP1 C-terminal domain-containing protein n=1 Tax=... [more]
A0A835ZJM0_9STRA1.060e-2349.56PSP1 C-terminal conserved region-domain-containing... [more]
A0A836CPR8_9STRA1.240e-2352.63PSP1 C-terminal conserved region-domain-containing... [more]
A0A6H5K2V5_9PHAE5.080e-1761.29Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A7S2XWC2_9STRA3.300e-1348.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2RAB1_9STRA3.240e-1248.31Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3DVM7_9STRA1.050e-1146.81Hypothetical protein n=2 Tax=Amphiprora paludosa T... [more]
B5Y510_PHATC1.430e-1146.32Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
B8BVJ8_THAPS7.840e-1141.94PSP1 C-terminal domain-containing protein n=1 Tax=... [more]
K0R8W3_THAOC6.530e-1040.00PSP1 C-terminal domain-containing protein n=1 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8955contigS-firma_M_contig8955:144..2444 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8955.19857.1mRNA_S-firma_M_contig8955.19857.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8955 144..2444 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8955.19857.1 ID=prot_S-firma_M_contig8955.19857.1|Name=mRNA_S-firma_M_contig8955.19857.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=308bp
MMRDGRFVPAAAMGGDGGGHPGMMYGEGGGGGGGYGGYGDAGGGGGGPGG
MMDIPWGGQDPVALYQALLMKQSLAAAHASGMNMNMRFPNMNMPAANVNG
MGMNMNMVDMAALAAAAQAASASGGRGGYGGTYRTGGGGGGYPGMDPHMQ
QGGFGRRDQRMGPRGDMGGGEYGMAGPMGGGVGVGPRLGPGSGPQMVRAG
GGGGGGMYEVVEQDLGDGNVYHVQFKRSARNFLLGKTCQRDLQVGDYVKV
EADRGEDLGMVVTIFPVPEAGRPLPATAGQKRGFGQYEKEHIIRAATEDE
VSMRKTRL
back to top