prot_S-firma_M_contig895.19850.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig895.19850.1
Unique Nameprot_S-firma_M_contig895.19850.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length139
Homology
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI)

HSP 1 Score: 115 bits (287), Expect = 4.920e-27
Identity = 70/128 (54.69%), Postives = 82/128 (64.06%), Query Frame = 0
Query:   14 GGLGWAIGMLTCILEIQRCC-AQHLLAGGVWSSADDL---LLETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEILERPPQTVLSFHGGTAGCSAVFELSLRQETQEDLWDP 137
            GGL WAIG L+C+L+         L+      SA+ L    LETVA  DN FV GMTLS+A AK+A+ AP+GERRKL SLQ + D+LLLEILER PQTV  F GG  GCSAVFE  L +E    L  P
Sbjct:  525 GGLDWAIGALSCLLQYPTMFDTADLIQLSRERSAEWLRTCFLETVACSDNPFVPGMTLSIAFAKSASVAPEGERRKLLSLQERVDTLLLEILERLPQTVQGFDGGMTGCSAVFEPELSREDARGLPGP 652          
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Match: A0A6H5JCX0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCX0_9PHAE)

HSP 1 Score: 76.3 bits (186), Expect = 1.820e-13
Identity = 43/85 (50.59%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   48 DLLLETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEILERPPQTVLSFHGGTAGCSAVFELSLRQETQE 132
            D  L  VA+ DN F++GMTLSVA       AP+GER  L ++Q    +LLLEILER PQTV  F+GG A CSAV       +T E
Sbjct:   50 DCCLRVVAASDNLFISGMTLSVARVDVTKKAPEGERGTLEAIQGHVHALLLEILERLPQTVNGFNGGMADCSAVLGPEFDSKTGE 134          
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Match: D8LT30_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT30_ECTSI)

HSP 1 Score: 74.7 bits (182), Expect = 6.740e-13
Identity = 39/74 (52.70%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   50 LLETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEILERPPQTVLSFHGGTAGCSAVFE 123
            LL  ++S DN F+ GM LSVA   A   A +GE+R+L+S+QA  D LLLE+LE  PQTV  F G    CSA+FE
Sbjct:  682 LLGAISSADNPFIPGMNLSVACTMATRRAMEGEKRRLASMQAAIDELLLEVLEHMPQTVKGFKGEMRDCSAIFE 755          
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Match: A0A6H5LDE6_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LDE6_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 2.350e-12
Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 0
Query:   50 LLETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEILERPPQTVLSFHGGTAGCSAVFE 123
            LL  ++S +N F+ GM LSVA   A   A +GE+R+L+S+QA  D LLLE+LE  PQTV  F G    CSA+FE
Sbjct:  930 LLGAISSANNPFIPGMNLSVACTTATRRAMEGEKRRLASMQAAVDELLLEVLEHMPQTVKGFKGEMRDCSAIFE 1003          
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Match: A0A6H5JX68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JX68_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 1.020e-11
Identity = 36/76 (47.37%), Postives = 52/76 (68.42%), Query Frame = 0
Query:   48 DLLLETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEILERPPQTVLSFHGGTAGCSAVFE 123
            D  L  ++ VDN F+ G++LSVA+ ++  +AP+ ERR L +LQ   D+LLL +L+R PQT+ SF GG  GC +V E
Sbjct:  215 DCFLGGLSFVDNPFIPGLSLSVALEESFKNAPERERRFLEALQKAMDALLLAVLDRLPQTIASFPGGVGGCESVLE 290          
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Match: D7FMG5_ECTSI (Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG5_ECTSI)

HSP 1 Score: 66.6 bits (161), Expect = 4.390e-10
Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 0
Query:   48 DLLLETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEILERPPQTVLSFHGGTAGCSAVFE 123
            D  L  ++ VDN F+ G++LSVA+ ++  +AP+ E R L +LQ   D LL  +L+R PQT+ SF GG  GC +V E
Sbjct:  212 DCFLGGLSFVDNPFIPGLSLSVALEESLKNAPERESRCLEALQKAMDDLLRAVLDRLPQTIASFPGGVGGCESVLE 287          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig895.19850.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FLB1_ECTSI4.920e-2754.69Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5JCX0_9PHAE1.820e-1350.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LT30_ECTSI6.740e-1352.70Ankyrin Repeat Transient Receptor Potential Channe... [more]
A0A6H5LDE6_9PHAE2.350e-1251.35Ion_trans domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JX68_9PHAE1.020e-1147.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FMG5_ECTSI4.390e-1044.74Transient receptor potential channel n=1 Tax=Ectoc... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig895contigS-firma_M_contig895:21728..22144 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig895.19850.1mRNA_S-firma_M_contig895.19850.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig895 21164..24733 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig895.19850.1 ID=prot_S-firma_M_contig895.19850.1|Name=mRNA_S-firma_M_contig895.19850.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=139bp
MSCDELRLHRCLPGGLGWAIGMLTCILEIQRCCAQHLLAGGVWSSADDLL
LETVASVDNSFVAGMTLSVAVAKAAADAPQGERRKLSSLQAKPDSLLLEI
LERPPQTVLSFHGGTAGCSAVFELSLRQETQEDLWDPC*
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