prot_S-firma_M_contig8933.19834.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8933.19834.1
Unique Nameprot_S-firma_M_contig8933.19834.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length241
Homology
BLAST of mRNA_S-firma_M_contig8933.19834.1 vs. uniprot
Match: A0A6H5KAS4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KAS4_9PHAE)

HSP 1 Score: 346 bits (887), Expect = 4.210e-116
Identity = 174/213 (81.69%), Postives = 194/213 (91.08%), Query Frame = 0
Query:   28 QVAHIFVNLANLVLLSRGMNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPSDFTAYKDGVVTYQRTFRAEHDGYLTVGDKTYPPTQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAIEDLDAVAEIEAIKKRIVNQQAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFGELPSPRPENV 240
            +VAH+FV+LANLVLLSRG N+L+EDFKYYSPGTGRLDRD FLRLTKTLDVAFSTFRV P++   YKDG VTY+RTFRA HDGYLTVGDKTYPP+QTKVISDVDLCAVSFDD GV+RSYA GLMVEVV+AIED DAVAEIE IKKR+VNQQAKMKSLEGQESSIAYSKCK+DID M +DM+ALLE+VNSAPNTEGLGGIPGLF  + +  PE++
Sbjct:  135 EVAHVFVSLANLVLLSRGKNVLAEDFKYYSPGTGRLDRDSFLRLTKTLDVAFSTFRVVPTELVVYKDGTVTYRRTFRAVHDGYLTVGDKTYPPSQTKVISDVDLCAVSFDDMGVVRSYADGLMVEVVHAIEDPDAVAEIEEIKKRVVNQQAKMKSLEGQESSIAYSKCKADIDVMKLDMEALLERVNSAPNTEGLGGIPGLFAAVGAEFPEDL 347          
BLAST of mRNA_S-firma_M_contig8933.19834.1 vs. uniprot
Match: A0A835ZLQ1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLQ1_9STRA)

HSP 1 Score: 175 bits (444), Expect = 1.770e-49
Identity = 90/201 (44.78%), Postives = 131/201 (65.17%), Query Frame = 0
Query:   29 VAHIFVNLANLVLLSRGMNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPSDFTAYKDGVVTYQRTFRAEHDGYLTVGDKTYPPTQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAIEDLDAVAEIEAIKKRIVNQQAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLF 229
            VA  F  +A L+LL RG NI+++DF Y+SP TG L+++ FL L +T D AF +   +P  FT YKDG+V+Y+  +R   DG LT+GDK   P     ISDV+LC VSFD+ G++RSYA G++V+     +D   +  IEA++ ++   + K++SL GQE +IAY K   +I+ +  ++  LLE+V+   NT GLGGI GLF
Sbjct:  136 VAKTFARMAPLILLMRGENIIADDFMYFSPCTGTLNKEEFLGLLRTTDRAFPSMASFPQSFTVYKDGLVSYRTAYRTSFDGPLTIGDKELAPNGVTAISDVELCTVSFDEAGLMRSYACGVVVDKADEYKDPAVMDRIEALQTKVAGNKIKVESLAGQEHTIAYQKSMEEINHLETELTFLLEQVDVEANTGGLGGIAGLF 336          
BLAST of mRNA_S-firma_M_contig8933.19834.1 vs. uniprot
Match: W7U8S2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U8S2_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 5.740e-15
Identity = 64/204 (31.37%), Postives = 98/204 (48.04%), Query Frame = 0
Query:   30 AHIFVNLANLVLLSRGMNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPSDFTAYKDGVVTYQRTFRAEHDGYLTVGDKTYPPTQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVY-AIEDLDAVAEIEAIKKRIVNQQAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFGEL 232
            A  F N+A  +++SRG N+LSEDF YYS  TG LDR  +L L   ++ A    R   S F    DG V Y         G L +G   +  +  K     ++C V+F++ G ++S + GL+VE      E+L A   +  + KR+ + + K++     +S  A  K + DID     ++A  EK +         G+ GL G L
Sbjct:  109 AKAFANMAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGHDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEDEELVAAEALSGLLKRLESHKQKLEMTPTGKS--AREKIQQDIDNTQAKIEAF-EKDSETVKVAHEAGLGGLLGAL 309          
BLAST of mRNA_S-firma_M_contig8933.19834.1 vs. uniprot
Match: A0A4D9DH59_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DH59_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.020e-13
Identity = 61/198 (30.81%), Postives = 95/198 (47.98%), Query Frame = 0
Query:   36 LANLVLLSRGMNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPSDFTAYKDGVVTYQRTFRAEHDGYLTVGDKTYPPTQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAI-EDLDAVAEIEAIKKRIVNQQAKMKSLEGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFGEL 232
            +A  +++SRG N+LSEDF YYS  TG LDR  +L L   ++ A    R   S F    DG V Y         G L +G   +  +  K     ++C V+F++ G ++S + GL+VE      E+L A   +  + KR+ + + K++     +S  A  K + DID     ++A  EK +         G+ GL G L
Sbjct:    1 MAPRIIVSRGWNVLSEDFVYYSSATGPLDRAEYLGLVAIMERALPDLRQDSSRFEVGADGTVLYVSQAVGTFTGQLQIGQDIHEGSGLKYQGLKEVCVVAFNEDGQLQSLSAGLVVEEGSDEGEELVAAEALSGLLKRLESHKQKLEMTPTGKS--AREKIQQDIDNTQAKIEAF-EKDSETVKVAHEAGLGGLLGAL 195          
BLAST of mRNA_S-firma_M_contig8933.19834.1 vs. uniprot
Match: A0A7S2SCC1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCC1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 8.810e-7
Identity = 58/236 (24.58%), Postives = 98/236 (41.53%), Query Frame = 0
Query:   29 VAHIFVNLANLVLLSRGMNILSEDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTF----------RVYPSDFTAYKDGVVTYQRTFRAEHDG------YLTVGDKT---YPPTQTKVISDVDLCAVSFDDTGVIRSYAYGLMVEVVYAIEDLDAVAEIEAIKKRIVNQQAKMKSL-----EGQESSIAYSKCKSDIDTMGMDMDALLEKVNSAPNTEGLGGIPGLFGELPSPRPENV 240
            +A  +  L+ +V+ +RG N+LS+DF ++SP TG L++D+FLRL   L      F          RV+P+       GVVT     +    G      +L  G +      P +  ++   +  AV+FDD G +     GL              + I  I  +I  + AK+K L     E  ES  ++     ++  +  ++  L E  + +P      G   L      P P+++
Sbjct:  106 MARTWAMLSPIVITARGPNVLSDDFVFFSPSTGLLEKDKFLRLNARLATLCPDFFNKLERDGEERVHPT-------GVVTLNYQPKGSFQGAVSEWSWLAKGSEAADHQAPVKKPLLGHWEAMAVAFDDQGRVLRLVSGLHAHDAEPEARNMVQSTIRDINGQIEKKLAKLKGLRKAHEENAESHPSFQATMKEMTALEEELKVLNENSHQSPTAGSFDGFRALLHAFDVPFPDDL 334          
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8933.19834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5KAS4_9PHAE4.210e-11681.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLQ1_9STRA1.770e-4944.78Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7U8S2_9STRA5.740e-1531.37Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A4D9DH59_9STRA1.020e-1330.81Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2SCC1_9STRA8.810e-724.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 166..186
NoneNo IPR availableGENE3D3.10.450.50coord: 21..179
e-value: 5.4E-6
score: 28.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8933contigS-firma_M_contig8933:179..3611 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8933.19834.1mRNA_S-firma_M_contig8933.19834.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8933 39..4441 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8933.19834.1 ID=prot_S-firma_M_contig8933.19834.1|Name=mRNA_S-firma_M_contig8933.19834.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=241bp
MPAARTAAISSSQPLSSSPSSTTTTNSQVAHIFVNLANLVLLSRGMNILS
EDFKYYSPGTGRLDRDRFLRLTKTLDVAFSTFRVYPSDFTAYKDGVVTYQ
RTFRAEHDGYLTVGDKTYPPTQTKVISDVDLCAVSFDDTGVIRSYAYGLM
VEVVYAIEDLDAVAEIEAIKKRIVNQQAKMKSLEGQESSIAYSKCKSDID
TMGMDMDALLEKVNSAPNTEGLGGIPGLFGELPSPRPENV*
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