prot_S-firma_M_contig8931.19833.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8931.19833.1
Unique Nameprot_S-firma_M_contig8931.19833.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length345
Homology
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BLAST of mRNA_S-firma_M_contig8931.19833.1 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 67.0 bits (162), Expect = 2.280e-8
Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = 0 
Query:    5 PSTKPLTRPPWEAFTFSNGEFRRAAEAPGHGNGGXXXXXXXXDLRWAGTGESVLPPPGICLVDQGKELRARRKYELN 81
            P  K   R  WEAFTFS G F+ A+  PG  N G             G+G  V PPPGICLVDQ KEL+ARRKYE++
Sbjct: 1355 PRRKDKRRSSWEAFTFSKGVFQLAS--PGSVNLGGGAL--------TGSGVPVPPPPGICLVDQAKELQARRKYEVS 1421
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BLAST of mRNA_S-firma_M_contig8931.19833.1 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 63.5 bits (153), Expect = 2.920e-7
Identity = 37/77 (48.05%), Postives = 43/77 (55.84%), Query Frame = 0 
Query:    5 PSTKPLTRPPWEAFTFSNGEFRRAAEAPGHGNGGXXXXXXXXDLRWAGTGESVLPPPGICLVDQGKELRARRKYELN 81
            P  K   R   EAFTFS G F+ A+ A    N               GTG +V PPPGICLVDQ KEL+ARRKYE++
Sbjct: 1023 PWRKNKRRSSLEAFTFSKGVFQLASPA----NASTAGSVNLGSGALTGTGVAVPPPPGICLVDQAKELQARRKYEVS 1095
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8931.19833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGI3_9PHAE2.280e-850.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJC8_ECTSI2.920e-748.05Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8931contigS-firma_M_contig8931:1785..4310 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8931.19833.1mRNA_S-firma_M_contig8931.19833.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8931 1785..4310 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8931.19833.1 ID=prot_S-firma_M_contig8931.19833.1|Name=mRNA_S-firma_M_contig8931.19833.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=345bp
MKDSPSTKPLTRPPWEAFTFSNGEFRRAAEAPGHGNGGSGDGGDGGDLRW
AGTGESVLPPPGICLVDQGKELRARRKYELNRADADTDVDVADMSDTPKR
PASPSLLTPADEAATETASPSGGTGSSGGGSGSGSGSKSEQAVGGNGAIG
AAELEPGSGQQPRHASVSHLHQHQQRQQQEGGREEEAGGGGGDPVLTSAF
SRLKKTGSTPGAKEGVNSPATALFSVASDCPPSSSGSGPDGSTGGGPTDP
VVSAPPAPAATATAAAAAAAAAPPSPSPAVRTSPIFAPIAAPATTKGSSG
ATRAAMAMSSLASRASGATAARLAASAAASVAKRSSPSSLSALSE
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