prot_S-firma_M_contig8931.19832.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8931.19832.1
Unique Nameprot_S-firma_M_contig8931.19832.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length353
Homology
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BLAST of mRNA_S-firma_M_contig8931.19832.1 vs. uniprot
Match: A0A6H5JGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 4.330e-12
Identity = 60/156 (38.46%), Postives = 76/156 (48.72%), Query Frame = 0 
Query:  218 SFRSAYRPRGGVTFGEKPWRESPPTLGNXXXXXXXXXXXXXXXXXXXXXXXXXXXSGLGLGLEES-EVAAAGVVDVGAAGGTGCNSSGYR-------------------PGSGQGLVVSRGVTIKADVRVPFSTVAVTRGGELAGRVVAREFLLED 353
            + R AYRPRGG+ FG+KPWR++ P                               +G G G E + + AAA +  +  AG                             P S QGLVVSRGV++ ADV VPF+TVAVTRGG+L GR+VA+EFLLED
Sbjct: 1899 ALRVAYRPRGGIAFGDKPWRDASPAQ--------------PALAAPGNHSKEGNKAGAGSGGEVAGDHAAAKMAGLRRAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPESEQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLED 2040
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BLAST of mRNA_S-firma_M_contig8931.19832.1 vs. uniprot
Match: D8LJC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.810e-10
Identity = 36/47 (76.60%), Postives = 42/47 (89.36%), Query Frame = 0 
Query:  307 PGSGQGLVVSRGVTIKADVRVPFSTVAVTRGGELAGRVVAREFLLED 353
            P S QGLVVSRGV++ ADV VPF+TVAVTRGG+L GR+VA+EFLLED
Sbjct: 1457 PESDQGLVVSRGVSVTADVHVPFATVAVTRGGKLCGRIVAKEFLLED 1503
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8931.19832.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JGI3_9PHAE4.330e-1238.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LJC8_ECTSI1.810e-1076.60Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8931contigS-firma_M_contig8931:24..1652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8931.19832.1mRNA_S-firma_M_contig8931.19832.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8931 22..1652 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8931.19832.1 ID=prot_S-firma_M_contig8931.19832.1|Name=mRNA_S-firma_M_contig8931.19832.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=353bp
EVSVKVVAVQAGAAARAAAPAAPAAVAVPSSPPRMPALETPVDMRKNATS
AAAAAGGGVSSGGGGGAGDGGGGGDVGDVGDVGDVGGDGDGFGGVASVDG
DVRAGRHASRVRRDGEKEGQEEQEQQRKLQASARARARARNRSRISISPN
TSSVGEGDGDDEESFHSAASASNSNGGGAAHGSTGNSNASTDSPPSELFK
SAHGGGGGGGGKGSGIGSFRSAYRPRGGVTFGEKPWRESPPTLGNPSTVD
GAGEVAGAGQPAGSAEASGSAESGLGLGLEESEVAAAGVVDVGAAGGTGC
NSSGYRPGSGQGLVVSRGVTIKADVRVPFSTVAVTRGGELAGRVVAREFL
LED
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