prot_S-firma_M_contig8930.19831.1 (polypeptide) Sphaerotrichia firma Sfir_13m male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_S-firma_M_contig8930.19831.1
Unique Nameprot_S-firma_M_contig8930.19831.1
Typepolypeptide
OrganismSphaerotrichia firma Sfir_13m male (Sphaerotrichia firma Sfir_13m male)
Sequence length131
Homology
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BLAST of mRNA_S-firma_M_contig8930.19831.1 vs. uniprot
Match: D8LNI2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNI2_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 7.170e-20
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0 
Query:    3 QIKLVFSPLFGGGVSSASAGGAVVGTSAL--GRKAGGAMRGFCAAISVVWSYAIIGSAQLDYSTWHNHANPSTNVWVRMSYGFWEPKNLTEGVFM 95
             ++LVFSP+FGG   +A+       T A+  GR++GGA RGF A ISVVWS+AIIG  QL++S     A+P+TN W RMSYGFWEP  +    FM
Sbjct:   37 HVQLVFSPMFGGSAETAA-------TPAVHSGRQSGGANRGFTAGISVVWSHAIIGDQQLNFSFGMGRADPATNPWCRMSYGFWEPGGMKCAAFM 124
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BLAST of mRNA_S-firma_M_contig8930.19831.1 vs. uniprot
Match: D7FHA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHA8_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 6.220e-19
Identity = 48/95 (50.53%), Postives = 62/95 (65.26%), Query Frame = 0 
Query:    3 QIKLVFSPLFGGGVSSASAGGAVVGTSAL--GRKAGGAMRGFCAAISVVWSYAIIGSAQLDYSTWHNHANPSTNVWVRMSYGFWEPKNLTEGVFM 95
             ++LVFSP+FGG   +A+       T A+  GR++GGA RGF A ISVVWS+AIIG  QL++S     A+P+TN W RMS GFWEP  +    FM
Sbjct:    4 HVQLVFSPMFGGSAETAA-------TPAVHSGRQSGGANRGFTAGISVVWSHAIIGDQQLNFSFGMGRADPATNPWCRMSDGFWEPGWMKCAAFM 91
[Close]
BLAST of mRNA_S-firma_M_contig8930.19831.1 vs. uniprot
Match: D7FLB4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB4_ECTSI)

HSP 1 Score: 90.1 bits (222), Expect = 1.730e-18
Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 0 
Query:    3 QIKLVFSPLFGGGVSSASAGGAVVGTSAL--GRKAGGAMRGFCAAISVVWSYAIIGSAQLDYSTWHNHANPSTNVWVRMSYGFWEPKNLTEGVFM 95
             ++LVFSP+FGG   +A+       T A+  GR++GGA RGF A ISVVWS+AIIG  QL++S     A+P+TN W RMSYGFWEP  +    FM
Sbjct:  209 HVQLVFSPMFGGSAETAA-------TPAVHSGRQSGGANRGFTAGISVVWSHAIIGDQQLNFSFGMGRADPATNPWCRMSYGFWEPGGMKCAAFM 296
[Close]
BLAST of mRNA_S-firma_M_contig8930.19831.1 vs. uniprot
Match: D7G1E3_ECTSI (Uncharacterized protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1E3_ECTSI)

HSP 1 Score: 89.0 bits (219), Expect = 1.810e-18
Identity = 48/95 (50.53%), Postives = 63/95 (66.32%), Query Frame = 0 
Query:    3 QIKLVFSPLFGGGVSSASAGGAVVGTSAL--GRKAGGAMRGFCAAISVVWSYAIIGSAQLDYSTWHNHANPSTNVWVRMSYGFWEPKNLTEGVFM 95
             ++LVF+P+FGG   +A+       T A+  GR++GGA RGF A ISVVWS+AIIG  QL++S     A+P+TN W RMSYGFWEP  +    FM
Sbjct:  211 HVQLVFAPMFGGSAETAA-------TPAVHSGRQSGGANRGFTAGISVVWSHAIIGDQQLNFSFGMGRADPATNPWCRMSYGFWEPGGMKCAAFM 298
The following BLAST results are available for this feature:
BLAST of mRNA_S-firma_M_contig8930.19831.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LNI2_ECTSI7.170e-2051.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FHA8_ECTSI6.220e-1950.53Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FLB4_ECTSI1.730e-1851.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G1E3_ECTSI1.810e-1850.53Uncharacterized protein n=3 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Sphaerotrichia firma male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 56..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 37..55
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
S-firma_M_contig8930contigS-firma_M_contig8930:31..875 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Sphaerotrichia firma male2022-09-29
Diamond blastp: OGS1.0 of Sphaerotrichia firma male vs UniRef902022-09-16
OGS1.0 of Sphaerotrichia firma Sfir_13m male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_S-firma_M_contig8930.19831.1mRNA_S-firma_M_contig8930.19831.1Sphaerotrichia firma Sfir_13m malemRNAS-firma_M_contig8930 31..875 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_S-firma_M_contig8930.19831.1 ID=prot_S-firma_M_contig8930.19831.1|Name=mRNA_S-firma_M_contig8930.19831.1|organism=Sphaerotrichia firma Sfir_13m male|type=polypeptide|length=131bp
MPQIKLVFSPLFGGGVSSASAGGAVVGTSALGRKAGGAMRGFCAAISVVW
SYAIIGSAQLDYSTWHNHANPSTNVWVRMSYGFWEPKNLTEGVFMKAFRS
SLQSARATWHKAVRLAAVGYANAKLLQVISD
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